Gene Lferr_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0861 
Symbol 
ID6876826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp819271 
End bp819564 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content60% 
IMG OID642788743 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_002219318 
Protein GI198282997 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.339436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTAG GTATTCCGGG TCAGATCACG AGAATCATCA GTGCGCGTGA ACGAAGAGCG 
GAGGTGGCAA TCAACGGGGT ACGGCGGGAG GTCAATATCG CCTGCATTAC CGATGCGGGG
CACCCCGCGG AGTCCTGTGT CGGTGACTGG GTGCTGGTGC ATGTGGGTTT TGCCATGAGC
CGCATCAGCG CGGAGGAGGC AGCCCTGACG CTGGATGTGC TGACGCAACT GGGTGAAGCT
CAACTGGAAA TGGATCGTAT GCGGGAGTCC GCGCCAACAG GTCCCATGGC GTAA
 
Protein sequence
MCLGIPGQIT RIISARERRA EVAINGVRRE VNIACITDAG HPAESCVGDW VLVHVGFAMS 
RISAEEAALT LDVLTQLGEA QLEMDRMRES APTGPMA