Gene Lferr_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0847 
Symbol 
ID6876812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp806370 
End bp807332 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content57% 
IMG OID642788729 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002219304 
Protein GI198282983 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.960379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC AACAGCTTCG TTTCATCTGC GCGGTGGTAC GCCAGAACTT CAATGCGTCG 
GCCGCCGCCG ACAGTCTGTA TACCTCACAA CCGGGGGTGA GCAAACAGAT CCAACTCCTG
GAAGAGGAGA TCAATGTGGC GCTTTTCGTG CGCAAAGGGA AGCGCATCAT CGGAATGACC
CCGGCGGGCG AGCAGATATT CACTTTTGCA CAGCGGGTAG TCGGCGATAT CGAGAATATC
CGAAAAGTAG GTCAGGAGTT TTCTCAGGGC GATCGTGGGG AATTTGTGAT CGCCACCACC
CATACCCAAG CGCGATACAG CTTGCCCAAG GCGATAAAGA CCTTTACGGA ACGCTACCCA
GGGGTTCAGT TGCGCCTGCG CCAGGGCAAC CCTACCCAGA TCGCGGAGAT GCTTGCGGCG
GGGGAGGCAG ACGTGGCGAT CGCAACGGAG TCGTTGAATT CCTACGCGGG CCTTGTCGCC
CTGCCCTGTT ATCAGTGGAA TCGCGTCGTG ATCACCCCTA CCGGCCATCC GCTGCTGCAA
AGCCAGCCAC TGACACTGGA AGCAGTCGCC GCCTATCCCA TAGTAACCTA CGACCAGGCC
TTTGCTGGGC GCTCCCTGAT CGACAAGACT TTCGCCAATC GCGGCCTGTC CCCCAACATC
GTGCTTTCCG CCATAGACTC CGACGTCATC AAGGCGTATG TGGAACTGGG GTTAGGGATA
GGCATCGTCG CCAAAATGGC TTATGACCCT GTACGGGACA TCAAGCTGGA GGTGATCGAT
GCGAGTCACC TGTTCGATCC CAGCACCACC TACCTGGCCT TGAGGCAGGG AACCTATTTA
CGCGGGTATC TATACACCTT CATAGCGTTA TACGCGCCAC ACCTCGATCG CAACACGGTG
GATCGGGCCC TGGATTCCAC AGTTGCTTCC AGGGCGTTAT TGCCGTTACC CTCCGGTTCG
TGA
 
Protein sequence
MNLQQLRFIC AVVRQNFNAS AAADSLYTSQ PGVSKQIQLL EEEINVALFV RKGKRIIGMT 
PAGEQIFTFA QRVVGDIENI RKVGQEFSQG DRGEFVIATT HTQARYSLPK AIKTFTERYP
GVQLRLRQGN PTQIAEMLAA GEADVAIATE SLNSYAGLVA LPCYQWNRVV ITPTGHPLLQ
SQPLTLEAVA AYPIVTYDQA FAGRSLIDKT FANRGLSPNI VLSAIDSDVI KAYVELGLGI
GIVAKMAYDP VRDIKLEVID ASHLFDPSTT YLALRQGTYL RGYLYTFIAL YAPHLDRNTV
DRALDSTVAS RALLPLPSGS