| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0842 |
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| Symbol | |
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| ID | 6876807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 801192 |
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| End bp | 803285 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642788724 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002219299 |
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| Protein GI | 198282978 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.801762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC CATTAGCAGT TTTCGCGCCA GGGGTGCATG ATCGTGTCGA TTATTATATC
TCCAAACGCT TATTTGACTC GGTATTCCCC CAGAACCAGA CTATTGGCAA ACCGGATGAA
GGTGGACATA CGATAATGTC TCATTATGAT ACGGATCCAT CAATGGATAA TGACTATATA
ACCCATGCCT GGGATCGTTG CACCGGACAA TATCGGTTGG ACGTGAATGG TGCCCCGGAA
CTGCAAAGAC TGGATGCGGG CAACCTCGGG CGACTGCTCG AGGAACAGCA TCTTTTTGTA
GAGATCGGAT CTGCGGAAAT GACGCGTCTG ATTAAACAGA CGTTGCGATT TTCCGAGGAT
GCCATGCTGC CGTCACCAGA TTGTACATTG CTGTTGCTGG ATGCCGGCGG TGTTGCTCTG
CACGCTGTCG GAACGGAACT CGAGAGCGGA CGTGATGCCC GCTATTCGGG TATGGACGCC
GGATTCATAT GGCGGGAAGA GTATGTCGGG GTGACCGGAC CGAGCCTTTG TCTGCATGAC
ATGAAGCCCC GCATGGTCCA CCGGGAGGAG CATTTATTTA GGAACTTTGT GGAGATGGCG
TGCTGCGCGA TGCCTATTTG GGCGCCATCT GGCGCACTGC TGGGGGTGAT CGATTCAACC
TATTCCCGCA GCGGTTATGC GAAGTCGGCA TATGTCTCGG TCATGCCGCT GCTGGCGCAA
CTGGCACGGC GGATCGAAAT GAAATATTTC GCCCGGAATT ATCAGGACCA TGTCATTCTG
TCGGTGAACA GGCTGAACGA CTATACCGAC CATGATGATG AAGCATTGTT TGCAATTAAC
GAGAATGGCG TCATTGTTGC GGCGGAATTC GCGCTGACGA AAGGCACTAT CGGTGATGCC
AAGGGCGGTC TTGTTGGTGC GAACTTGCGG GATGTGTTCG ACGTTTCGCT GGACAAGATG
CTGGACGATC ACCATCGTGC CGAAAAGTCG CACTCCAGAA CCCTGCTCCG GAATACCGGA
AGGCATGATG GTCTGCGGGT ATTTTCGCTG CCGGACAAAG TGTCGTTCAC GGCTGTCGTG
AACGGTATTC TCCGGAATAC ACCGCATTCC AGGGACGAAG CTTCGGTTCA GGTGCATGAT
TCCCTGTTGG CGTTGTCGGG CGATGACGCG GTGGTATCGG AGAATATTCG TCGTATCCAT
AAAGTATTGA ACAAAAACAT CAGTATTCTG CTACTGGGCG AAACCGGCAC TGGCAAAGAT
ACCCTTGCGC GCGCCATACA CCGCGCCAGC GATAGAAGAG ATAAACCTTT TGTTGCGATC
AATTGTGCAG CCATACCCGA ATCGCTCATC GAGAGCGAGC TATTCGGGTA TGAGCCCGGC
TCCTTTACCG GGGCGAGTCG CGTGGGCAAG CAGGGTAAGG TGATGGCCGC CAATGGTGGC
ACGCTGTTCC TCGATGAAAT CGGAGACATG CCCGCCGCGC TTCAGGGGCG TCTGCTGCGA
GTTCTCGAAG AACGGGAGGT TACCCCCCTT GGTACCACCA AAGCCAGCCC CGTAGATATT
CGGGTGATCA GTGCAACCAA TAAGTCGATC AATGATCTGG TGCAGCAGGG AGGCTTTCGG
ACTGACCTGC TTTATCGGAT TAATGATGTC GTGCTAAGCC TGCCGCCACT GCGGGAACGG
AGCGATAAAA TCCGGCTCGT GGAAACCATT TGTCAACAGG AATGTGGCGT ATCTGAAATG
GAGATATCAG CGGAAGTATG GAATATTTTT CTGGGTTATT CCTGGCCTGG TAATATCCGC
GAACTTCGTA GTGTGATTCG TACTGCCCTG GCGCTGAGTG ATGGTAATGC CATCCGCTGC
GAAGACCTGC CGGAACGGCT GGTGACCGGC GAAAGGGCCG GTGGCCGCGT AACAACGGCA
CCGGCGACCA CACCACCATG GAGCGATAGC GACGCGCTGG AGCGGAACAG AATCCTCGCG
GAGTTGGAGC GTCACCACTG GCGGGTGATC GATACCGCGA AATTCCTCAA GGTCAGTCGT
AATACTTTGT ACCGTAAAAT GCGCCTGTAT GGCATTATGG ACGCTGACGC ATAA
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| Protein sequence | MTTPLAVFAP GVHDRVDYYI SKRLFDSVFP QNQTIGKPDE GGHTIMSHYD TDPSMDNDYI
THAWDRCTGQ YRLDVNGAPE LQRLDAGNLG RLLEEQHLFV EIGSAEMTRL IKQTLRFSED
AMLPSPDCTL LLLDAGGVAL HAVGTELESG RDARYSGMDA GFIWREEYVG VTGPSLCLHD
MKPRMVHREE HLFRNFVEMA CCAMPIWAPS GALLGVIDST YSRSGYAKSA YVSVMPLLAQ
LARRIEMKYF ARNYQDHVIL SVNRLNDYTD HDDEALFAIN ENGVIVAAEF ALTKGTIGDA
KGGLVGANLR DVFDVSLDKM LDDHHRAEKS HSRTLLRNTG RHDGLRVFSL PDKVSFTAVV
NGILRNTPHS RDEASVQVHD SLLALSGDDA VVSENIRRIH KVLNKNISIL LLGETGTGKD
TLARAIHRAS DRRDKPFVAI NCAAIPESLI ESELFGYEPG SFTGASRVGK QGKVMAANGG
TLFLDEIGDM PAALQGRLLR VLEEREVTPL GTTKASPVDI RVISATNKSI NDLVQQGGFR
TDLLYRINDV VLSLPPLRER SDKIRLVETI CQQECGVSEM EISAEVWNIF LGYSWPGNIR
ELRSVIRTAL ALSDGNAIRC EDLPERLVTG ERAGGRVTTA PATTPPWSDS DALERNRILA
ELERHHWRVI DTAKFLKVSR NTLYRKMRLY GIMDADA
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