Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0832 |
Symbol | |
ID | 6876797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 788357 |
End bp | 790711 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642788714 |
Product | EcoEI R domain protein |
Protein accession | YP_002219289 |
Protein GI | 198282968 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.916446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.633032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGCA AAGAGAAGAA AAAACTAAGC GAGTCTGACA TCTGCGACCT ATTCATCACG CCCGCGATCA ATAAAGCTGG CTGGGAACCA ATGACGCAGA TTCGTCGCGA GGTGACGCTC ACGCCCGGCC CGGTCGTCGT GCGCGGCAAC ATGTCCTCGC GCAACAAGAA GAAAAAGAAA TTCGCCGACT ACGTTCTGTC CTGGGAGCCG GGCGTACCCG TCGCCGTGGT TGAGGCCAAA GACAATAATC ACATCGTCAG CCACGGCATC CAGCAGGCGC TCGGCTATGC GGAAATCCTC GATGTGCCGA GCGCCCTCAG TTCAAACGGC GATGCCTTTG CTTCCCATAA CAAAGCTCCC GCCGCTGGCG AAAACATCGA GACAGAGTTT CCGCTCGAAT CCTTCCCTAC ACCTCAGGAC TTGTGGAAGC GCTACAAATC CTATCGCGGC ATCGAAGATG AAGCAGAAAA ACTGGTCGTG CAGCCTTACC ACCTGGATGT GTCGGGCAAG GAGCCGCGCT ACTACCAGGT GGAGGCGATC AACCGTGCCG TCGAAGCCGT GGCCGGCGGC AAGAAACGCG TGCTGCTCGT CATGGCAACG GGCACCGGCA AGACCTACAC GACATTTCAA ATTATCTGGC GCTTGTGGAA AGCGGGCGAG GTCAAACGCA TCCTGTTTCT GGCTGACCGG AACATCCTCA TCGACCAGAC CCTCGTCAAC GACTTCAAGC CCTTCGGCTC GGTCATGACG AAGATCAAGA ACCGCAAGAT CGACCCGTCC TACGAAATCT ATCTCGGCCT GTATCAGGCC ATTACCGGCC CGGACGAAGA AGACAAGATA TTCAAGTATG TCTCGCGCGA TTTTTTCGAC ATGATCGTCA TCGACGAATG CCATCGCGGC AGCGCGGCGG ACGATTCCGC CTGGCGCGAA ATCCTCGAAT ACTTCAACAA CGCAGTTCAG CTCGGTCTCA CCGCCACGCC CAAGGAAACC AAATACGTTT CGAGCAGCAC CTACTTTGGC GAGCCGGTTT ACACCTACAG TCTCAAGCAG GGGATCGAAG ATGGCTTTCT CGCGCCCTAC AAGGTCGTGC GCATCGACAT AGACAAAGAC ATCGAAGGCT GGACGCCGCC GCCAGGCATG ACGGACGATC TGGGCCAGGA AATCGAGCAC CGCGAGTACA ACCAGAAGGA CATGGATCGC ATTCTGGTGC TCAACCAGCG CACCAAGCTG GTTGCCAGGC GCATTATGAA ATATCTCAAT GCGACCGACC CGTTTTCCAA GACCATCGTT TTTTGCGAAG ACATCGACCA CGCCGAACGC ATGCGTGTGG CACTGGTGAA TGCGGCAGGC CAGCTCGCGC TGGACAATCC GAAATACATC ATGCGCATCA CCGGCGACAG CGTCGAGGGC AAGGCCGAGT TGGACAACTT CATCGACCCG GAGATCAAGT TCCCGGTTAT CGCGACCACC TCGGAATTGC TGACCACGGG CGTCGATGCC AAAACCTGCA AGCTCATCGT GCTGGACAAG ACCATCACCT CGATGACCAG CTTCAAGCAG ATCATCGGGC GCGGCACCCG CATCGACGAG GAAAACAACA AGTGGTTCTT CACCATCATG GATTTCAAGA AGGCCACCGA GTTGTTCCGC GACCCGGACT TCGATGGCGA AGCCGTGGTC ATCTACGAGC CCGGCGATGA CGACGACCCC GTGCCGCCCG ATCCGGAGCC CGGCGAAGGG GATGACGAGG GCGATGGCGG TGTCGACGAA ACACCCGGCG TCTACAAAGT CCGCGTCAGC GGGGTGGACG TGAATATCAT CTCCGAGCGC GTCGAATACA TCGGGCCGGA CGGCAACCTG ATCACCGAGT CCTACAAGGA CTTCAGCCGC AAGCAGATTC GGAAAGAATT CACCTCGCTG GATGACTTCC TCAAGCGCTG GAACAACGCC GCGAAAAAGC AGGCCCTCAT CGACGAGCTG GAAGAACACG GCATCGTTCT GGACAACCTC GCCACGGAAA TTGGCAAGGA CTACAGCGAC TTCGACCTGA TCTGCCATAT CGCCTGGGGC CAGCCCCCGC TCACCCGCAA AGAGCGCGCC AATAAGGTCA AGAAGCGCAA CTACTTCACC AAATACGGCG AACAGGCCCG CGCCGTACTC ACCGCGCTGC TCGACAAATA TGCCGACGAA GGTATCGCCA CACTGGAAAG CGCCAAGGTG CTGCGCCTCG ATCCTTTCAA GACCATAGGC ACGCCCGTGG AAATCATCAA CACCATCTTC GGCGGCAAAG AAAAGTACGA ATCCGCCATC CAGGAACTGG AACAAGAGCT GTTTAAGAAG GAAGAATCTG CATGA
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Protein sequence | MDSKEKKKLS ESDICDLFIT PAINKAGWEP MTQIRREVTL TPGPVVVRGN MSSRNKKKKK FADYVLSWEP GVPVAVVEAK DNNHIVSHGI QQALGYAEIL DVPSALSSNG DAFASHNKAP AAGENIETEF PLESFPTPQD LWKRYKSYRG IEDEAEKLVV QPYHLDVSGK EPRYYQVEAI NRAVEAVAGG KKRVLLVMAT GTGKTYTTFQ IIWRLWKAGE VKRILFLADR NILIDQTLVN DFKPFGSVMT KIKNRKIDPS YEIYLGLYQA ITGPDEEDKI FKYVSRDFFD MIVIDECHRG SAADDSAWRE ILEYFNNAVQ LGLTATPKET KYVSSSTYFG EPVYTYSLKQ GIEDGFLAPY KVVRIDIDKD IEGWTPPPGM TDDLGQEIEH REYNQKDMDR ILVLNQRTKL VARRIMKYLN ATDPFSKTIV FCEDIDHAER MRVALVNAAG QLALDNPKYI MRITGDSVEG KAELDNFIDP EIKFPVIATT SELLTTGVDA KTCKLIVLDK TITSMTSFKQ IIGRGTRIDE ENNKWFFTIM DFKKATELFR DPDFDGEAVV IYEPGDDDDP VPPDPEPGEG DDEGDGGVDE TPGVYKVRVS GVDVNIISER VEYIGPDGNL ITESYKDFSR KQIRKEFTSL DDFLKRWNNA AKKQALIDEL EEHGIVLDNL ATEIGKDYSD FDLICHIAWG QPPLTRKERA NKVKKRNYFT KYGEQARAVL TALLDKYADE GIATLESAKV LRLDPFKTIG TPVEIINTIF GGKEKYESAI QELEQELFKK EESA
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