| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0829 |
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| Symbol | |
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| ID | 6876794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 786058 |
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| End bp | 787116 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788711 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_002219286 |
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| Protein GI | 198282965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0242691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.504253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA AAAAAGCCCT CATCGCCCTC TCGGGAGGAG TGGATTCCGC CGTGGCGGCC
CTGCTCATGC AGGGGCAGGG CTACGAACTC ACCGGCGTGA CCATGCGCCT GTGGCCCAGG
AGCCGCTGCT GCGATGAAAA AGATATCGAA GACGCCGCCG AGATCTGCGC CCGTCTGGGG
ATTCCCTACA CGGTGCTGGA TTATCGCGAG GCGTTCCGAC GTCAGGTGGT CGACGTATTT
GTCGCCGAAT ATCAGGCGGG GCGTACGCCC AATCCTTGTG CGCGCTGCAA TCAGTTCCTC
AAGTTCGATG CTTTGCTGGC GGAAGGCGAA AAGTTGGGCG CCACGATGCT GGCGACGGGC
CATTATGCGC GGCTGGCGGA AACCTCCTCG GGTACTGCTC TGCTGCGTGG CCGTGACCAT
GCCAAAGATC AATCCTATTT TCTTTTCGCC ATTGGCGCGG GGATACTGTC CCGCCTGCGC
TTTCCCGTGG GTGGCATGAA CAAGGACGAG GTGCGCGCCA TGGCCCGTAA GCATGGCCTG
CCCGTGGCCG CCAAGCAGGA CTCACAGGAT ATCTGCTTTG TCCCGGACGG CGACTACCGC
CGCTTTCTGG AGGATTACGC CGGGCTGGAC ATGGCGCAGG AAGGAGAGAT GGTTGACAGC
AGCGGGCAGG TGCTGGGCCA TCATCCGGGT ACGCTCCACT TCACCGTAGG GCAGCGCAAA
GGTCTGGGTG GCGGCAGTGA CCAGCCGCGC TATGTCCTTG CGCTGGACCC GGCGCAGAAC
CGGGTGATTG TCGGAGGTGA GGATGAGCTC TACCGCGGTG TGGTCAGCCT GGCCGAGTGC
AACTGGCTGA CGGATTTGTC CCCCGGCGAA ACCCACGCCG TGACCGTAAA ACTGCGTTAC
CGCTCCCGCG CCGAGTCGGC CATGCTGCAT CTGCTCTCCG ATGCCCGGGC CGAACTCCGC
TTTCGCGAGC CGCAACGCGC CGTTACCCCC GGTCAGGCCG CCGTCTGCTA TCAGGGTGAG
CGCCTGCTGG GCGGAGGGTG GATTCAGGGC ACGGAATAG
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| Protein sequence | MADKKALIAL SGGVDSAVAA LLMQGQGYEL TGVTMRLWPR SRCCDEKDIE DAAEICARLG
IPYTVLDYRE AFRRQVVDVF VAEYQAGRTP NPCARCNQFL KFDALLAEGE KLGATMLATG
HYARLAETSS GTALLRGRDH AKDQSYFLFA IGAGILSRLR FPVGGMNKDE VRAMARKHGL
PVAAKQDSQD ICFVPDGDYR RFLEDYAGLD MAQEGEMVDS SGQVLGHHPG TLHFTVGQRK
GLGGGSDQPR YVLALDPAQN RVIVGGEDEL YRGVVSLAEC NWLTDLSPGE THAVTVKLRY
RSRAESAMLH LLSDARAELR FREPQRAVTP GQAAVCYQGE RLLGGGWIQG TE
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