Gene Lferr_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0823 
Symbol 
ID6876788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp782231 
End bp782662 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID642788705 
ProductFeS cluster assembly scaffold IscU 
Protein accessionYP_002219280 
Protein GI198282959 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0640926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.782754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACA GTGAAAAGGT GATCGATCAT TATGAACATC CCCGCAACGT GGGGGCACTG 
GACAAGGATG ACAGCGGCGT CGGCACCGGT ATGGTGGGTG CACCGGCCTG CGGCGATGTG
ATGCGTTTGC AGATCAGGGT GAACGGGCAG GGCATTATCG AAGATGCCAA GTTCAAGACC
TATGGCTGCG GTTCGGCCAT TGCGTCCAGT TCGCTGGTGA CGGAGTGGGT CAAGGGCAAA
ACCCTCGATG AAGCGATGGC CATCAAGAAC AGCCAGATCG CCGAAGAGCT GGAACTGCCT
CCGGTCAAGA TTCACTGCTC CGTGCTGGCC GAAGACGCCA TCAAGGCGGC GGTGGAGGAT
TACCGCAAAA AGCAGGGTGG CGCGTCGACG GCGGCGCAAC CGGAAATGGC CGGTGCCCAG
GCGGCACACT AG
 
Protein sequence
MAYSEKVIDH YEHPRNVGAL DKDDSGVGTG MVGAPACGDV MRLQIRVNGQ GIIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TLDEAMAIKN SQIAEELELP PVKIHCSVLA EDAIKAAVED
YRKKQGGAST AAQPEMAGAQ AAH