Gene Lferr_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0817 
Symbol 
ID6876782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp776990 
End bp777853 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content64% 
IMG OID642788699 
Productprotein of unknown function DUF815 
Protein accessionYP_002219274 
Protein GI198282953 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGTC AACAGGTGAT TCAGGGTTTA GCCGCTCTTT TGGGGGACAG CAGCAGCCAT 
CCTCTGCCCG ATTTTGCCGG GGTAAAGGCC GCGCGCTGGC GCCATCTGCC CCTCGGTGGC
CGTCTGGAAG GGGTGGCGCG CGTGGATTTG CCGGAGATGG ACGAACTGCT CGGCATCGAG
GATACCAAGG CCGCACTGGA CCTGAACACC CGCCAGTTTG TCGCCGGTTT TCCCGCCAAT
GACGCCTTGC TCTGGGGCGG GCGGGGCACG GGCAAGTCTT CGCTGGTCAA GGCGCTCCTG
CGTCGCTATG CGGATCAGGG ACTGCGGGTG ATTGAAATCG ACCCGGACGG CATCCTCGAC
CTCCCGGAGA TTCTGGCGGC GTTGCAGGCG GCCGATCCGC AGCAGGCCTA CTACTTTGTG
CTCTTCTGCG ATGACCTGTC TTTTGGTGCC GACGACCCCG GCTACAAAGC CCTCAAGTCC
CTGCTCGATG GCGGTGTGGA GGCGCGTCCG GATAATGTGC TGCTTTACGC CACCAGCAAC
CGGCGGCATC TGATGCCGCG CCATTTTGCC GATAACGAGG AATATCACCG CCACGGTGAG
GAAATCATCC CCGGCGAGAC GGCGGAAGAA AAAATCAGCC TCTCCGAGCG CTTCGGCTTA
TGGCTGGGCT TTTATCCCTT CGATCAGGCC ATGTATCTGG ATATTTGCAT TATCCATCTG
CAGCGTCTGG GGGTGCGGAC GCCGCAGGCG GAATGGCGGG AGGAGGCCCT GCGCTGGGCC
TTGCAGCGCG GCTCGCGCAG TGGCCGCGTG GCGCGGCAGT TCGCCCGCCA CTGGGCAGGA
TCCAGGGCGC TGGCGGCACG ATAG
 
Protein sequence
MERQQVIQGL AALLGDSSSH PLPDFAGVKA ARWRHLPLGG RLEGVARVDL PEMDELLGIE 
DTKAALDLNT RQFVAGFPAN DALLWGGRGT GKSSLVKALL RRYADQGLRV IEIDPDGILD
LPEILAALQA ADPQQAYYFV LFCDDLSFGA DDPGYKALKS LLDGGVEARP DNVLLYATSN
RRHLMPRHFA DNEEYHRHGE EIIPGETAEE KISLSERFGL WLGFYPFDQA MYLDICIIHL
QRLGVRTPQA EWREEALRWA LQRGSRSGRV ARQFARHWAG SRALAAR