Gene Lferr_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0802 
Symbol 
ID6876766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp761487 
End bp762242 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID642788683 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002219259 
Protein GI198282938 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.445237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CCCTCGACGA CGCTGCACTG CTGCGTTACG CACGCCAGAT TCTCTTGCCG 
GAAATCGACA TTGCCGGACA GCAGGCACTG GCGGCCGGCC GGGTGCTGAT CATCGGCATG
GGCGGCCTGG GCTGCCCGGC CGCCCAGTAT CTGGCGGCCG CGGGCGTCGG CAACCTGACC
GTCTGCGATG GAGATCAGGT CGATCTCAGC AATCTGCAAC GCCAGATTCT CTATGGCGAG
GCCGACCTGG GGCGCCCCAA AGCCTTGGCC GCACGCGATC GACTGCGCGC CATGAACCAG
CAGATTCGGG TCAGCGCCTG GGTGGAATCA GCGCAACCCG AGTCTCTTGC CGCGGCACTG
GACACCCACG ATGTGGTACT GGACTGCACC GACAACTTCG GCAGCAGGCA CGCCATCAAC
CGCGCCTGCC GTAATGCTGG TAAACCTCTG GTCAGTGCCG CGGCCATCCG TTGGGAAGGG
CAACTCGCCG TCTTTGATTT TCGTGTATCG GAAAGCGCCT GCTATGCCTG TCTCTACCCG
GACGGCGTAG AGGATACCGA AGATACCTGC TCTCGCAGCG GCGTCCTTGG CCCACTCCTC
GGTGTACTCG GCAGCATGCA GGCAGCAGAA GCCATCCGCC TGCTGTGTAC CGGCCATTCC
CCGCTGGCCG GGCAACTCCT GCTGGTGGAT GCGCAAAGCT GGCAGTGGCG GCAGATCGCC
CTGCGCCGCG ACCCGGCCTG TGGCGTTTGC GCATGA
 
Protein sequence
MTDTLDDAAL LRYARQILLP EIDIAGQQAL AAGRVLIIGM GGLGCPAAQY LAAAGVGNLT 
VCDGDQVDLS NLQRQILYGE ADLGRPKALA ARDRLRAMNQ QIRVSAWVES AQPESLAAAL
DTHDVVLDCT DNFGSRHAIN RACRNAGKPL VSAAAIRWEG QLAVFDFRVS ESACYACLYP
DGVEDTEDTC SRSGVLGPLL GVLGSMQAAE AIRLLCTGHS PLAGQLLLVD AQSWQWRQIA
LRRDPACGVC A