Gene Lferr_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0800 
Symbol 
ID6876764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp760371 
End bp761147 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID642788681 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002219257 
Protein GI198282936 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.179814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGG CCCCAGAGTT TTCTGTGACG TCCTTCAACA TCCAGGTGGG CATCGGCTCC 
CACCGCGCCC GGCACATGTT CCTGCACGGC TGGAAGTACG TGATGCCCCA TGGTCAGAGT
CTGCGCAACC TGGAGCGGAT CGCCGCGGTC TTGGAGGGAA CCGACGTCGC CGGACTCAAC
GAAGTCGATG CCGGCTCTTT TCGCAGCCAG TATGTCAACC AGGCGGGTTT TCTCGCTGAC
CGCGCCCATT TCCCTTACTG GGCGCAACAA CGTACCCGTG ACTTCGGCGA CTTTGCCCAG
CACAGCAATG GCATTCTCTC CCGCTGGCCC ATTGAAGAGA CCATAGCGCA TTCCCTGCCC
AGCTTCATGA ATGGGCGCGG CATGCTGGAA AACCGGCTCA ACGCTGGTGG AAGATCCCTG
ACAGTGATCA TCACCCACCT CGGCCTTAGC CGTCATGCGC GCCTCAGTCA GATACGCGAT
CTCGCCCAAC GCCTGCGCGG ACGCCCGAAT CTCATTCTCA TGGGCGACCT GAACTGCACG
GCGCGCTCCC CGGAAATGCG CCTGCTCCTC AATGAAAGTG GCCTGCAGGC GCCGCCCTGG
AGCCCACCGA CCTTTCCCAG CTGGTCACCG CGCTTTTCCT TCGATCACAT CCTCTGTAGC
CCTGACCTGG AATTCACGAT GATTGAAACC GTCACCGAGC CCCTCTCCGA TCACCTCGCC
CTCAAGGCAA AACTGCGCTG GGACTCGGCG ACAGCGGCAG ATGCAAAGCA CCAGTGA
 
Protein sequence
MTEAPEFSVT SFNIQVGIGS HRARHMFLHG WKYVMPHGQS LRNLERIAAV LEGTDVAGLN 
EVDAGSFRSQ YVNQAGFLAD RAHFPYWAQQ RTRDFGDFAQ HSNGILSRWP IEETIAHSLP
SFMNGRGMLE NRLNAGGRSL TVIITHLGLS RHARLSQIRD LAQRLRGRPN LILMGDLNCT
ARSPEMRLLL NESGLQAPPW SPPTFPSWSP RFSFDHILCS PDLEFTMIET VTEPLSDHLA
LKAKLRWDSA TAADAKHQ