Gene Lferr_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0799 
Symbol 
ID6876763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp759923 
End bp760426 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content61% 
IMG OID642788680 
ProductWater Stress and Hypersensitive response domain protein 
Protein accessionYP_002219256 
Protein GI198282935 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTG TCGCACGAAG TTCCCGCATC ACCCAACGGT TTCGCTGCTG GGTTGCGTTG 
CTGGTCGCGC TGCCCCTCAG CGCCTGCGGA GCCTTCCCTG CTCACCAGCC GGAAGTGCAG
TTGCTGAATA TTCAGCCCGA AACGGTAGGA CTGGTCGCGC AGACTTTTAT GCTGTCGCTC
AAGGTCAGCA ACCCCAATGA CAGCGCGCTC CATGCCAAGG CGGGGGAGGC GCGCCTGTAT
GTGCGGGATC GGCAGGTGGC CTACGGATTG CTGGACAAGC CGATCGAGGT GCCCGCCTAT
GGTAGCGCCA CGGTGAGCAT CCCGGTCACA GGCAATTTTC TGACATTGCT GGGGGATCTC
GGCAGTATCA GCGCCGGGGC GGGGCTCCCC TATACCGTCA AAGGTTATCT GGTGACCGGC
ATGTTCGATA TGCGGGTACC TTTTACCGTC ACTGGTGCTT TGCATCTGCC GCTGTCGCCG
AGTCCCAGCG CAGTTTTGCC TTGA
 
Protein sequence
MAIVARSSRI TQRFRCWVAL LVALPLSACG AFPAHQPEVQ LLNIQPETVG LVAQTFMLSL 
KVSNPNDSAL HAKAGEARLY VRDRQVAYGL LDKPIEVPAY GSATVSIPVT GNFLTLLGDL
GSISAGAGLP YTVKGYLVTG MFDMRVPFTV TGALHLPLSP SPSAVLP