Gene Lferr_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0797 
Symbol 
ID6876761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp757891 
End bp758742 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID642788678 
ProductABC transporter related 
Protein accessionYP_002219254 
Protein GI198282933 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.126555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCT CCGACGCCAT TGTCCTGACC GATATCGCCA CCCGGTTCGG AACCCACTGG 
GTTCAGCGGC ACCTCGATCT GACCGTTCGG TGCGGGGAGA TACTCGCCAT CGTCGGCGGC
AGCGGCACCG GCAAGACCAC GCTGCTGCGC GCCATGATGG GCCTCGTTCC CATCGCTGAA
GGACGGATGA CCATCCTTGG CGAAAATCCG CAAGCGCTCA ATCTGCGCGA ACTGATTGCC
CTGCGCCAGC GCTGGGGGGT GCTCTTTCAA CAGGGAGCCC TGTTCAGCGC CCTGACGGTT
TATGAAAATA TCGCCTTTCC GCTACTGGAG TGGGGACATC TCAGCCGTTC CGAAATCAGC
GATCTGGTAG CTCTGAAGTT GCAAATGGTA GGCCTGAAGC CCAGCGACGC ATGGAAACTG
CCGGCGGAGT TGTCGGGAGG AATGGTCAAA CGGGTCGCCC TCGCCCGCGC CCTGGCCATG
GAGGCGGAGA TTCTCTTTCT CGACGAACCC ACTTCCGGAC TCGACCCTAT CGCGGCCGCG
GAATTTGACG CCCTGCTTCG GCAGGTCCAC GGCGACATCG GCTTTACCGT GGTCATGGTC
AGTCACGACC TGGACAGCCT CGCCGCCACC GCTGATCGTG TCGCGGTACT GGCCGACGGC
AGAGTGCTGA CGGTCGGTTC ACTGATCGAG GTTCAACAGG TGGACTTCCC CTATATCCGT
GCATTCTTTC ATGGGGAACG GGGCGAGCGC CTGCTGACCA GCCTCCGCGC CGCAGAAAAA
TGCCCTACTC TCCCCAGCGC TGCGCAATCC GGTTCGGCAA CCCCAGTTGG TCCAGAATCC
GCGCCACGAT GA
 
Protein sequence
MVRSDAIVLT DIATRFGTHW VQRHLDLTVR CGEILAIVGG SGTGKTTLLR AMMGLVPIAE 
GRMTILGENP QALNLRELIA LRQRWGVLFQ QGALFSALTV YENIAFPLLE WGHLSRSEIS
DLVALKLQMV GLKPSDAWKL PAELSGGMVK RVALARALAM EAEILFLDEP TSGLDPIAAA
EFDALLRQVH GDIGFTVVMV SHDLDSLAAT ADRVAVLADG RVLTVGSLIE VQQVDFPYIR
AFFHGERGER LLTSLRAAEK CPTLPSAAQS GSATPVGPES APR