Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0795 |
Symbol | |
ID | 6876759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 755942 |
End bp | 757309 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788676 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_002219252 |
Protein GI | 198282931 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.394088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCC ACGTCCTCGG CGTCTGCGGG ACTTTCATGG GAGGCATCGC GCTGCTGGCG CGGGCGGCGG GGCATCAGGT AACGGGTTCG GATGCACACA CCTATCCTCC CATGAGTGAT CTGCTGGCCC GCGAAGGGGT TACGGTCCAT GAAGGCTATG ATCCCGCTCA ACTGAATCCT GTCCCCGACC TGGTACTCAT CGGTAACGCC CTGTCGCGGG GCAACCCCTG TGTGGAGGCG GTTCTGGACC GGCAGATGCC CTATGATTCC GGTCCCGCCT GGCTGTCCCG GGAGATACTG CAAAGCCGCT GGGTATTGGC CGTGGCGGGT ACCCACGGCA AGACCACGAC GACCTCCATC CTGACCTGGA TATTGCAGGA GGCAGGACTC GATCCAGGGT TTCTCATCGG TGGGGAGGCG CGCAATTTCG GTGTATCGGC GCGGCTGACG GACAGCCCTT TTTTTGTGAT CGAGGCGGAT GAGTATGACA CCGCCTTTTT CGATAAACGT TCCAAGTTCG TGCACTATCA CCCGCGGTCG CTGATACTCA ACAATCTGGA ATACGATCAT GCCGATATAT TTCCGGATAT GGAGGCGATC ATCACCCAGT TTCACCACCT GCTGCGCACC GTACCCGGCG CGGGCGCGAT TATCGTGAAG GATGGAGTGC CAGCGCTGAA ACGGGTGCTG GAGCGCGGTT GTTGGACACC CCTGCAACGC TTTGCCGGTA CGGGCGAGTG GCAGGTGCGG CTGGACGCTG TGGATGGCAG CCGTTTTACC GTGCTGGAGC AGGGCGTCGA GCGCGGGCAA GTCGGTTGGG AGATGGCCGG GTCGTTCAAT GCCGAGAATG CATTGGCGGC CTTGCTGGCG GCGCGGCATG CCGGGGTGCC GCTGGCGGTC GGATGTGCAG CATTGCGCAG CTTTCAGGGG GTGCGGCGGC GCCTGGAGCT GCGCGGACGG GCTGGCGGCG TGGCGGTGTA TGACGACTTT GCTCACCACC CCACGGCCAT CGCCGCCACC ATCACGGCCC TGCGCGGGCG GATGGAGGGG ACGGAGCGTC TGATTGCCGT GCTGGAACCA CGCTCCAACA CCATGAAGAT GGGGGTGCAC CGGCAGACGC TGGGACCAAG TTTGCAAGGC GCGGATCGAG CGTTTGTCTA TGCTCCGGCA GATCTGGGTT GGGATGTGGC GGCCGCCCTG GATTCCGCTG CGCAAGTTTA TGTCGATATG GACGCGCTCT TGCGGGCGCT GGACGCAGAA TTGCGCCCGG GGGATGATGT GCTCATCATG AGCAACGGTG CCTTCGGCGG GATTCACGGA CGCCTGCTCG AACGTCTCGC CCGACGGGAT GTACCGGCAG GGTCGTAA
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Protein sequence | MHIHVLGVCG TFMGGIALLA RAAGHQVTGS DAHTYPPMSD LLAREGVTVH EGYDPAQLNP VPDLVLIGNA LSRGNPCVEA VLDRQMPYDS GPAWLSREIL QSRWVLAVAG THGKTTTTSI LTWILQEAGL DPGFLIGGEA RNFGVSARLT DSPFFVIEAD EYDTAFFDKR SKFVHYHPRS LILNNLEYDH ADIFPDMEAI ITQFHHLLRT VPGAGAIIVK DGVPALKRVL ERGCWTPLQR FAGTGEWQVR LDAVDGSRFT VLEQGVERGQ VGWEMAGSFN AENALAALLA ARHAGVPLAV GCAALRSFQG VRRRLELRGR AGGVAVYDDF AHHPTAIAAT ITALRGRMEG TERLIAVLEP RSNTMKMGVH RQTLGPSLQG ADRAFVYAPA DLGWDVAAAL DSAAQVYVDM DALLRALDAE LRPGDDVLIM SNGAFGGIHG RLLERLARRD VPAGS
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