Gene Lferr_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0784 
Symbol 
ID6876748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp745070 
End bp745426 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID642788665 
Producthypothetical protein 
Protein accessionYP_002219241 
Protein GI198282920 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00308528 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACG GTCACGATGA TCCGACATTG CATCCGGAAG TACAGATGTC CACTTCCCGG 
GGATATTTTT CAGGGTTCGC GATTTCCAGC ATCCTGATGT TCGTCGCTAC CTTTTTGGTG
GCATCGCGTG CCGTGCCGCC ATTCGGTTTG CTGATGGTCA TCTCGGTCTG CGCGGGCATA
GCGATTATCG CGCAGATCTA CTTCCTGCTG CATATCGATG TTTCCGAACA CAACATCTGG
AATACCGTGG CGCTGGTGCT GTTCATGCCG CTTTTTCTGA TTACCATCGG ACTGACCTGG
TGGATGTTCT CGCAATTGTA TCTGCGCACG ATGATTATGC CGGGCATGAT GCACTGA
 
Protein sequence
MSHGHDDPTL HPEVQMSTSR GYFSGFAISS ILMFVATFLV ASRAVPPFGL LMVISVCAGI 
AIIAQIYFLL HIDVSEHNIW NTVALVLFMP LFLITIGLTW WMFSQLYLRT MIMPGMMH