| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0780 |
|---|
| Symbol | |
|---|
| ID | 6876744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 739718 |
|---|
| End bp | 740470 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642788661 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_002219237 |
|---|
| Protein GI | 198282916 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCC GGCCTTCCGT CCTTATTCTG CTCAGCGCGG CGCAACGTCT TCGCCTCGAT
GACGGCACCG AGGTTGCTAC CGGATTCTGG GCCGAAGAGC TGGTGACACC CTGGCAGATA
CTGCGCGAAG CAGGATGGCA AACGCACGTC GCCACTCCGG GCGGGGTGCG GCCGTCGGTC
GATGCCGAGA GTCTCGAGCC CGCCGCTCTT GGGGGCGATA CCCGCAAGGC CGCCCGGTTA
TGCGACGCCG TGGCGCAGAT CACGGACTTA ACCACACCTG CCGATTTGAA TGCGCTGACG
GGCGAGGACC TGGACGCCTT GGCCGGTGTT TTCATTCCCG GCGGCAATGG GCCGCTCATG
GACCTCTGCC GGGCACCGGC GATGGATCGC CTGCTGCGCT ACTGCCTAGC GACGGCAAAG
CCCGTCGCCA CCCTCTGCCA CGGCAGCGCA GCACTCCTCG CCACCTGCGG TGGGGCGGAC
CGTTCGCCTT TCCTGGGGCA ACGGGTAACC TGCTTCAGTG CGGCGGAAGA ATCGGCAACA
GCGCTGGCCG GGCGTTGGCC TTATACCCTC GAAGACCGGC TCCGGCAGGA AGGCTTCCTG
GTCAGCGTCG GCGTTCCGTG GCAAAGCCAT GTGGTCACGG ACCACCTCAT CCTCAGCGGC
CAGAATCCGG CCTCTGGGGC CGCACTTACC CATGCTTTCA TACAACGCCT CACCTCCACC
CCAACACATA AAGGAAAAGC ACATGAATAC TGA
|
|---|
| Protein sequence | MTTRPSVLIL LSAAQRLRLD DGTEVATGFW AEELVTPWQI LREAGWQTHV ATPGGVRPSV
DAESLEPAAL GGDTRKAARL CDAVAQITDL TTPADLNALT GEDLDALAGV FIPGGNGPLM
DLCRAPAMDR LLRYCLATAK PVATLCHGSA ALLATCGGAD RSPFLGQRVT CFSAAEESAT
ALAGRWPYTL EDRLRQEGFL VSVGVPWQSH VVTDHLILSG QNPASGAALT HAFIQRLTST
PTHKGKAHEY
|
|---|
| |