Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0773 |
Symbol | |
ID | 6876737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 734088 |
End bp | 734900 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788654 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002219230 |
Protein GI | 198282909 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACCA GACTGCCGGT CAAGATAGTG ACTGGCAACG CGCCCCTTCT CGGCGACTTC ATCCGCCGTC ACCGTGGAAA AGTCACTCCG CAGCAGGCCG GCCTCAGCAC ACAGGGACGA CGACGCACTC AGGGTTTGCG CCGTGAGGAA CTGGCCCTCC TCTGTGGAAT CAGCAGCACC TGGGTTACCT GGATAGAGCA AGGCCGCCCC GTACAGCCCT CCACTGCCGT GCTGGATCGC CTGAGTCAAA CGCTGCAACT CTCCGAAGCG GAGCGCGCCT ACCTGTTCGA TCTGGCCGGC CGCGCTGATC CCACTGCCGA CAAAGCCCAT ACCCAGCCCC CGCATACCGT ACTGCGGATC GTGCAAGCCC TGGACACACC TGCCTATGTA CTGGATCGCT ATTGGAATGC GATCGCCTGG AACACGGCTG CGGCGGCGCA TTTTGTCGGC TGGATGGACC AACCCCCTGC ACCGGGCAAC CCTCCCCCTA ACTTGCTGGA ATTCCTCCTG CTGAATCCCA CGGCGCGCAG TTTTGTCGCC GACTGGGAAG GCCGCACCCG GCGGATCATC GCGGAATTCC GCGCGGATGT GGGCAAGCAC CTGGACGATC CGCAAATGGC CCGCCAAATC GAGCACCTTC AGCAAAACAG TCCGATTTTT GCTCAGCTCT GGGCTGCACA GGACGTCGTC GAACGGGAGG GTGGCAGGCG GGTTTTCCAG CATCCTCAGC ACGGGCAGGT GGTCTATGAG CAGAGCACGT TATTGCCAGC CACCAGCACC GATTTCAAGC TGGTCATCCT GCTGCCGGAA TAG
|
Protein sequence | METRLPVKIV TGNAPLLGDF IRRHRGKVTP QQAGLSTQGR RRTQGLRREE LALLCGISST WVTWIEQGRP VQPSTAVLDR LSQTLQLSEA ERAYLFDLAG RADPTADKAH TQPPHTVLRI VQALDTPAYV LDRYWNAIAW NTAAAAHFVG WMDQPPAPGN PPPNLLEFLL LNPTARSFVA DWEGRTRRII AEFRADVGKH LDDPQMARQI EHLQQNSPIF AQLWAAQDVV EREGGRRVFQ HPQHGQVVYE QSTLLPATST DFKLVILLPE
|
| |