Gene Lferr_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0756 
Symbol 
ID6876720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp716366 
End bp717271 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID642788637 
ProductABC-3 protein 
Protein accessionYP_002219213 
Protein GI198282892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.929566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.294702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAATC TTTGGATGTT TTTGGAAAAC TCCGGTTTCT TCGCTAGCGG ACCGGTGCAA 
ACCGCGTTGA TCGTAGGGAC TTGTGCAGCG CTGGTCAGCG CGGTGATCGG TATGTTTACC
ATATTGCGCG GCAATGCCTT TGCCGGACAT GCCCTGGCCG ATGTAAGCAG CGCCGGCGGG
GCGGCCTCCT TCCTGCTGGG CATCAATCCC TTGCTGGGTT TTCTGGGTAT GGCCTGGATT
GCGGCCTTCG GCATGGAGTT TCTTGGTGTA CGCAAGGTGC GGGAGCGTGA TCTTGCCACG
GGCATCGTTC TGGGGGCGGG ATTGGGGCTG TCGGCGCTCT TTCTCTATCT GGACGTGACG
ACCACCAGCA CTACGGGCGC AGCGGTGTCG GTGATGTTCG GCTCCATGTT TGCGATTCCG
CAGAGTCTTA TCGGTCCTGC ATTGATGGCC TCCGCCGGGG TGTTCTTGCT GGTGGGTCTG
CTCTACCGGC CTATGATGTT GATGGCGGTG GACCCTGATC TGGCGGCGGC GCGAGGTATT
CCCCTGCGTT GGATCGGTTT GCTGCAACTG CTGGCCCTGG GACTGGCGGT AGCAGTCTGC
GCCCTGGCCA TCGGCGCGGT GCTGGCGACA GCTTTGCTCA TTGGCCCGGC GGGTGCGGCG
ATTCGCCTGA GTCGGCGCCC GGTACAGGCG ATATGCTGGG CCATTGCTAT CGGTTTGACC
GCGGTCTGGG TGGGTATCTG GATGGCCTAT GAGAGTTACT ACTGGTTTTC CGGTAATGCC
TGGCCAGTGA GCTTTTTTAT CGTGGCGCTG GTGTTCCTGT TTTATTTGGC GGCGGTGCTG
GTGGCTAAAG TAGCGGGCTT GTCAGCGCGT CCGAAGTCGG TCAGTTGGCC GCACTGCGAG
GCATAG
 
Protein sequence
MWNLWMFLEN SGFFASGPVQ TALIVGTCAA LVSAVIGMFT ILRGNAFAGH ALADVSSAGG 
AASFLLGINP LLGFLGMAWI AAFGMEFLGV RKVRERDLAT GIVLGAGLGL SALFLYLDVT
TTSTTGAAVS VMFGSMFAIP QSLIGPALMA SAGVFLLVGL LYRPMMLMAV DPDLAAARGI
PLRWIGLLQL LALGLAVAVC ALAIGAVLAT ALLIGPAGAA IRLSRRPVQA ICWAIAIGLT
AVWVGIWMAY ESYYWFSGNA WPVSFFIVAL VFLFYLAAVL VAKVAGLSAR PKSVSWPHCE
A