| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0754 |
|---|
| Symbol | |
|---|
| ID | 6876718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 714591 |
|---|
| End bp | 715523 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788635 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_002219211 |
|---|
| Protein GI | 198282890 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.130073 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TGGGCTTTCG GAATGCACGT ATTCATCCGG CGTCCGCCTT GCTGACGCTG
ATCGCCCTGT GCGCGGGGCT GGGCACGGCG CAGGTGGCTG CCGCAGCGAC CATTCATGCG
GTCGGGATAG AAAATCAATA TGCCAACGTG ATCAGTCAGA TCGGCGGTGA ATATGTGTCG
GTCACTGCGA TCCAGAGCAA CCCCGGCACA GATCCGCACG CCTTTGAAGC CAGTCCTGCG
GTGGCCCGGG AGCTTGCCGC GGCGCAGCTC GTGGTGCGGA ATGGGGTCGG CTATGACGGT
TGGGTCCGGA AAATTTTGCG GGCAAACCGG AACGCGCAGC GCAGGGTGAT CGTCGTCCAG
GATCTGCTTC ATCTGCCGGA AAACACCCCC AACCCCCATC TCTGGTACAA GCCGGAGACC
ATGCCTGCGG TGGCGCAGGC AGTTGCGGCG AGCCTGACCG AACTGGATCC GGCCCATGCC
GCCACCTTCG CGGCCAATGT GCGCAGGTTC GATGCCTCTC TGAAACCGTG GTACCACGCC
ATCGCCCGCT TCAAGGCCCG CTTTGGCGGC ACGCCGGTGG CAGTGACGGA GCCCGTCGCC
GATTATTTGC TGGAAGCCGC GGGTTGCGAC ATCAAAACGC CGTGGAAACT CCAGGCCGCC
ATCATGAATG GTACGGACCC GGCACCGCAG GATGTGAGCG CCCAGAACCA GCTCCTGCAG
CGGCATCAGG TCAGAGTCTT TGTGTATAAT CAGCAGGTGA CAAATTCATT GACGGCTTCT
TTCCTGAGTC GGGCGCAGGC GGCGAAGATC CCCGTGGTCG GTGTCTATGA AACCATGCCG
GCGGGTTACC ACTATCAGTC TTGGATGCTG GCGGAGGTAA ATGCGCTGCG TAACGCGGTG
GAGCATGGCA CTTCGACGAC CGTGCTGAAG TAA
|
|---|
| Protein sequence | MTDLGFRNAR IHPASALLTL IALCAGLGTA QVAAAATIHA VGIENQYANV ISQIGGEYVS
VTAIQSNPGT DPHAFEASPA VARELAAAQL VVRNGVGYDG WVRKILRANR NAQRRVIVVQ
DLLHLPENTP NPHLWYKPET MPAVAQAVAA SLTELDPAHA ATFAANVRRF DASLKPWYHA
IARFKARFGG TPVAVTEPVA DYLLEAAGCD IKTPWKLQAA IMNGTDPAPQ DVSAQNQLLQ
RHQVRVFVYN QQVTNSLTAS FLSRAQAAKI PVVGVYETMP AGYHYQSWML AEVNALRNAV
EHGTSTTVLK
|
|---|
| |