Gene Lferr_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0753 
Symbol 
ID6876717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp712999 
End bp714345 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content62% 
IMG OID642788634 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_002219210 
Protein GI198282889 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0158404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CCCCCCATTC TACGCTGGAT ACCAGCGTCC TGACCCAAAT CGTTGATGAC 
ATGCTCCACC TCGCCCGCGA GCAGGGTGCC AGTGCGGCGG AGGCTTCCGC CAGCACCGGC
AAAGGCTTGT CGGTAACCGT GCGCCTCGGA GAAGTGGAAT CCATCGAATA CCACCAGGAC
AAGGGGCTGG GGGTCACGGT CTATCTCGGT CAGTCCAAAG GCAGCGCCTC CACCTCGGAC
TTTTCCCGCA AGGCCTTGTC AGAAACCGTT TCAGCGGCGC TCACCATTGC CCGGCATACG
GCGGCAGACC CGTTTGCCGG GCTTGCCGAT CCCGAACTTT TCGCCAAAAC CTTCCCGGAT
CTGGACCTCT ATCATCCCTG GTCCATAGAT GCAGACAGCG CCGCCGATCT GGCGCGTCGT
TGCGAGGCGG CCGCCCGTGA GAGCGATCCG CGCATTCACA ACTCCGAAGG CGGCAGCCTC
GGCACCGGCG AGGGCTCGTC GGTCTATGGC AATAGCCTGG GTTTCATGGG CAGCAGCCGA
TCATCGCGAC ACAGCCTGTC CTGCTCGGTG ATTGCGGAAG ACCGTAACGG CGGAATGCAA
CGGGACTACT GGTATGACGT GGCCCGTGCC GCCGATGCGC TGGCGACGCC GGAAACCATC
GGCAGGACCG CCGCGCAGCG CGCTCTGCGC CGCCTGGACG CCCGCAAGGT AGCCACCACC
AAGGCCCCGG TGCTCTTTGA AAACCAAGTC GCGTCCAGCC TTATCGGCCA TCTCGCCAGC
GCCATCAGCG GCAGCAGCCT GTATCGCAAA AGTTCCTTTC TGGTGGACAG CCTTGGCAAA
CAACTCTTCC CGGAACACGT CCGCGTTTAT GAAGAACCCT TACGGCGTCG TGGGTTGGGT
AGCTGCAGTT TCGACGGCGA AGGGGTCGCC ACCCGCAACC GCGACATCGT CTCCGGGGGC
GTACTGGAAG GCTACATCCT CGACAGTTAC AGTGCCCGCA AATTAAACAT GAAGACCACG
GGCAATGCGG GCGGCGCCCA CAACCTCACC TTGCAGCCGG GCAAGGCATC TCTCGATGAA
CTGCTCCACC AGATGGGGCA CGGCCTGCTG GTTACCGAGC TCATCGGCTT CGGCATCAAC
ATGGTGACCG GTGATTACTC CCGAGGCGCT GCCGGCTTCT GGGTGGAGCA TGGGGAGATC
CAGTATCCCG TCGAAGAGAT CACCATCGCC GGGACCTTGC AGGGCATGTT CCAGGGCATG
CGCGCCGTAG GCAATGACCT GCTCATTCAC GGCAACACCG GCTGCCCCTC CATCCTCATT
GACGAGATGA TGATTGCCGG CGACTGA
 
Protein sequence
MSQAPHSTLD TSVLTQIVDD MLHLAREQGA SAAEASASTG KGLSVTVRLG EVESIEYHQD 
KGLGVTVYLG QSKGSASTSD FSRKALSETV SAALTIARHT AADPFAGLAD PELFAKTFPD
LDLYHPWSID ADSAADLARR CEAAARESDP RIHNSEGGSL GTGEGSSVYG NSLGFMGSSR
SSRHSLSCSV IAEDRNGGMQ RDYWYDVARA ADALATPETI GRTAAQRALR RLDARKVATT
KAPVLFENQV ASSLIGHLAS AISGSSLYRK SSFLVDSLGK QLFPEHVRVY EEPLRRRGLG
SCSFDGEGVA TRNRDIVSGG VLEGYILDSY SARKLNMKTT GNAGGAHNLT LQPGKASLDE
LLHQMGHGLL VTELIGFGIN MVTGDYSRGA AGFWVEHGEI QYPVEEITIA GTLQGMFQGM
RAVGNDLLIH GNTGCPSILI DEMMIAGD