Gene Lferr_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0752 
Symbol 
ID6876716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp711510 
End bp713030 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content60% 
IMG OID642788633 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_002219209 
Protein GI198282888 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00179484 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTGG GTGCGTTGAA AAAACCGTCC TTTCCTCTGC GGCTTCTGGC CGCATTAATT 
TTGGGCGCAG CCTGGCCTTT GGCCTTTGCG CCCTTCGCCT GGTGGCCGCT GGCCATAGCC
CTGCTTTTTG GCTTGTTCTG GCTGGCGATC ACGGAGGAGC GCCCACAGCG TCTGGCGGCT
CTGGGCGCGG GTTTCGGTTT TGCTGCTTTT GCCGCGGGAA CGAGCTGGAT CGCCATTACC
CTGCATAATT TCGCCAACAT GGATTGGGCA CTGGCAGGTG CCGCGGTCGC TTTGCTGGCG
GCTTGTTGCG CCGTCTACGC GGCGTTGGCC TTATGGCTGG CGGGCCGCTT TTTTGTCGGG
AATGGCCGGT TGCTGGCGCT GCCGGTGTTG TGGACTTTGG TGGAATGGGC GCGGGCACGC
CTCTTTACGG GCTTCCCCTG GCTGGCGACG GGATATACCC AGACCCATGC CTTCCTCGGT
GGCTTTGCGC CCTGGCTGGG GCAATACGGA GTGGGGCTGG CGACGGCCGG GGTGGCGGTC
ATCCTGGTCT ATATGCTGCA ACGGCGGCAG TCCCGCCCGG TGCTCTTGGG CGGCGTCGTG
TCGCTCCTGG TGATTTCCGG GGCAGCCATG GCGGCGGGGT CCGTGTCCTT CACCCATCCT
GTAGGCAAGC CGCTGCGGGT AAGTCTGCTG CAGGGCAACA TTGCCATCTC GGAGAAGTGG
AATGCTGCCA AAGTCAGCGC CATCCTGCAT CATTACGTAA ACATGATTTT GCAGACGCCG
CCCGATACCC GGCTGATCGT CCTTCCGGAG ACTGCCTTCC CTCTCTTTCA GACCGAAATA
CCAAGCCTGA TCGAACAGTT GCAGCAATGG TCAGCGACGC ACCGTAAAAT CCTGCTCATC
GGTATTCCCG AGGAGGTCGG CCGCAAATAT TACAACGCGG CGATGGAAAT TGACGGGAAG
GCACCGCTGC GCTGGTATCG GAAAGAGCAT CTGGTGCCCT TCGGAGAATA TATTCCGATG
CCCGTTTTAC TCGGGCCTCT GGTACATCAT TTTTTGCCGG GGCTCGGCAG TTTCTCTTTT
GGAGATGGAC CTTACGCCCT GCCCGTAGAC GGGCAGAAAG CCGGTATGAC CATCTGCTAT
GAAGAGTCCT TCTCCCGGGA TGTGCGCAAG GGCGTCAGGG AGGGTGCCAC CTTTCTTTTG
AATATCAGTG ATTATGCATG GTACGGCCAC AGCATCGCCG CCGCGCAAAG TCTGCAAATG
GCGGCCATGC AGTCCCGGCA GGAGCAGAAA CCCGATGTTC GCGCGACCAA TACGGGTATT
ACCGCCCTGA TCTCCCCCCA TGGGCGGGTA ATTTCGCAAC TGCCCCAGTT TGTGGGGGGC
ACTCTGAACG GGGCCATCCA GCCGATGAGC GGAGAAACAC CCTTCGGGCG CTGGGGCAGT
CTCCCCTATC TGCTGTTGAG TTCAGTTCTT TTGCTGCTGG CCCTTGTCCT CAGTCGCCGG
CAATCATCAT CTCGTCAATG A
 
Protein sequence
MKVGALKKPS FPLRLLAALI LGAAWPLAFA PFAWWPLAIA LLFGLFWLAI TEERPQRLAA 
LGAGFGFAAF AAGTSWIAIT LHNFANMDWA LAGAAVALLA ACCAVYAALA LWLAGRFFVG
NGRLLALPVL WTLVEWARAR LFTGFPWLAT GYTQTHAFLG GFAPWLGQYG VGLATAGVAV
ILVYMLQRRQ SRPVLLGGVV SLLVISGAAM AAGSVSFTHP VGKPLRVSLL QGNIAISEKW
NAAKVSAILH HYVNMILQTP PDTRLIVLPE TAFPLFQTEI PSLIEQLQQW SATHRKILLI
GIPEEVGRKY YNAAMEIDGK APLRWYRKEH LVPFGEYIPM PVLLGPLVHH FLPGLGSFSF
GDGPYALPVD GQKAGMTICY EESFSRDVRK GVREGATFLL NISDYAWYGH SIAAAQSLQM
AAMQSRQEQK PDVRATNTGI TALISPHGRV ISQLPQFVGG TLNGAIQPMS GETPFGRWGS
LPYLLLSSVL LLLALVLSRR QSSSRQ