Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0748 |
Symbol | |
ID | 6876712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 707808 |
End bp | 709163 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642788629 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002219205 |
Protein GI | 198282884 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000201593 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGAACC TGTATATCAA GACTTACGGC TGTCAGATGA ACGAATATGA CTCCGAGCGC ATGGCGGATA CGCTTGCGGT CAGTCATGGC CTGCGTCTGG TGGACGATCC GGTGCTCGCC GATGTGCTCC TGCTCAACAC CTGCTCCATC CGTGAAAAGG CCGAAGACAA GGTCTTTACC CAGCTCGGCT TCTGGCGCCC TTTCAAGGAA AGGCGCCCGG AGGTGGTGAT CGGTGTAGGG GGCTGCGTGG CCAGCCAGGA GGGAGAGCGA CTGAGGCGGC GCGCCCCTTA CGTGGACCTG GTGTTCGGTC CGCAGACGCT GCACCGGTTG CCAGATTTGC TGGATGCCTG TCTGGCCGAG CGCCGTCCGC AGGTGGATAT CGCTTTCCCG ATGCTGGAAA AATTTGATCA TCTGCCGCAA CGGCCGGGCC GCGACGGCGC GACGGCCTTT GTCACCATTC AGGAAGGTTG CGACAAATTC TGTACCTTCT GTGTGGTGCC CCATACCCGG GGGCGGGAAT ACAGCCGCAG CATGCCTGAT ATCCTGCGTG AAGTGCGTGC GCTGGTGGAG CAGGGGGTGC GCGAGATCAC CCTGCTGGGG CAGAATGTCA ATGCCTACCG GGGCGCGACA GGACTGGTAG GCGAGGGTGG CCTGGCCGAT CTGCTGGAAC GCCTGGCGCG GATTCCCGGT TTGCTGCGCC TGCGTTACAC CACGTCCCAT CCCGCCAACC TCGACGACGA ATTGATTGCT GCGCATGGCA GTATCGGTAT TCTCGCGCCG CATTTACACC TGCCGGTACA GAGCGGATCG GATCGCATCT TGCGGCGTAT GCATCGCAAG CATACGGTCG GGCAGTATCT GGACAAGGTT GACCGTCTGC GTGCCGCCCG TCCGGGTATC CAGATTTCTT CGGATTTCAT CGTCGGATTT CCGGGTGAAA CCGATGCAGA TTTTGCCGCG ACCATGGAAT TGATCGATGC GGTGCGCTTC GACCAGTCAT TTTCCTTCAA ATATAGCCAG CGCCCCAACA CCCCGGCGCT GAAACTGAAG GACAGCGTGC CAGAGGCCGT GAAGGAAGAT CGCCTGGCGG TATTGCAGGG ACGTATCAAC GGCTTGGCGC AGGGCTACGC ACAAGCTCTG GTGGGCACGC AGCAGGCGGT CCTGATAACG GGGCCGTCGC GCCGCGATGC GCAGGAACTG ACGGGGAAGA CCGCCTGCAA TCGTGCAGTC AATTTGGCGG GATCCATGGA TTGGGTCGGA CAGATGCTGG ATGTCGAAAT TACGGCGGCG TTGCCTAACA GTCTGCGCGG GCGCGCGGCG CTTGTGGCGC CGACGAGCCA GCGCCTTGCC GTATAA
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Protein sequence | MQNLYIKTYG CQMNEYDSER MADTLAVSHG LRLVDDPVLA DVLLLNTCSI REKAEDKVFT QLGFWRPFKE RRPEVVIGVG GCVASQEGER LRRRAPYVDL VFGPQTLHRL PDLLDACLAE RRPQVDIAFP MLEKFDHLPQ RPGRDGATAF VTIQEGCDKF CTFCVVPHTR GREYSRSMPD ILREVRALVE QGVREITLLG QNVNAYRGAT GLVGEGGLAD LLERLARIPG LLRLRYTTSH PANLDDELIA AHGSIGILAP HLHLPVQSGS DRILRRMHRK HTVGQYLDKV DRLRAARPGI QISSDFIVGF PGETDADFAA TMELIDAVRF DQSFSFKYSQ RPNTPALKLK DSVPEAVKED RLAVLQGRIN GLAQGYAQAL VGTQQAVLIT GPSRRDAQEL TGKTACNRAV NLAGSMDWVG QMLDVEITAA LPNSLRGRAA LVAPTSQRLA V
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