Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0739 |
Symbol | |
ID | 6876703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 698685 |
End bp | 699635 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788620 |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_002219196 |
Protein GI | 198282875 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000114246 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATCTTG CAAGTATACC CATAATCCGC TGCATAACCC ATTCTGCGGC GCGTTGCGGT GTGCAGGCTC TGTGGCATAA TGTGCCCATG AATATCCTCC TGCTGGTCGC CGCACTCCTC ATCATCCTCG CCGGCGCAGA GGCTTTTACC AACGCACTGG AGCACCTGGG CGACCGTCTG GGTATTTCCG AGGGCGTTAC CGGTTCCATT TTCGCGGCGG TGGGCACGGC GCTTCCCGAG ACCATGGTAC CTGTCGTTGC GGTTTTTGCT GCGACCAGCG GGCAAGCGGT GCACCTGGGA GAAGAGGTGG GTGTGGGCGC CATTCTGGGC GCCCCGATGA TGCTGTCCAC GCTGACGTTG TTCATGATGG CGCTGTTTGT ATCGCCACAG CGCGGCTGGC GCGGAGCATT AAATCCGGAA CCTACCGGCC TGCGTCGCGA TCTTGGCTGG TTTCTGATTG CCTTCGGCCT CTCGACCGTT GCCCTTTTCG TGCCTCACCA CATTACTCTG GCGCGTATCG GCATCGGCCT GATGCTGGTC ACATTGTATT TTCTGTATGT GATGGTGACC CTGCGCGCCT CTGCGGCGCT GGTCGCCGAG GGACACGGCA CCGAAGCAGG GCACGCCTTG TACTTGAGCA AGACGGGCCT GCCCACGAAG ATGCAGGTCA TTTTGATTCA GCTTGCCATA GGACTTGGCA TGATCGTCTT TGGCGCCAGC CTTTTTGTCG ACGGAATCGA GGGACTCTCG CACTGGCTCG GTATTTCTGC GCTGATCCTG TCTTTACTGG TGGTGCCCAT CGCGACGGAG CTGCCGGAGA AGATCAACAG CATCCTGTGG GTTCGCCGCG GCAAGGATAC GCTGGCGTTT GGCAACATCA CCGGGGCGTT GGTCTTTCAA GGGAGCCTGC TGCCCGCTAT TGGGGTGATG CCAGGGCCAT GTCAACCTTA G
|
Protein sequence | MDLASIPIIR CITHSAARCG VQALWHNVPM NILLLVAALL IILAGAEAFT NALEHLGDRL GISEGVTGSI FAAVGTALPE TMVPVVAVFA ATSGQAVHLG EEVGVGAILG APMMLSTLTL FMMALFVSPQ RGWRGALNPE PTGLRRDLGW FLIAFGLSTV ALFVPHHITL ARIGIGLMLV TLYFLYVMVT LRASAALVAE GHGTEAGHAL YLSKTGLPTK MQVILIQLAI GLGMIVFGAS LFVDGIEGLS HWLGISALIL SLLVVPIATE LPEKINSILW VRRGKDTLAF GNITGALVFQ GSLLPAIGVM PGPCQP
|
| |