Gene Lferr_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0739 
Symbol 
ID6876703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp698685 
End bp699635 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID642788620 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_002219196 
Protein GI198282875 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000114246 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTTG CAAGTATACC CATAATCCGC TGCATAACCC ATTCTGCGGC GCGTTGCGGT 
GTGCAGGCTC TGTGGCATAA TGTGCCCATG AATATCCTCC TGCTGGTCGC CGCACTCCTC
ATCATCCTCG CCGGCGCAGA GGCTTTTACC AACGCACTGG AGCACCTGGG CGACCGTCTG
GGTATTTCCG AGGGCGTTAC CGGTTCCATT TTCGCGGCGG TGGGCACGGC GCTTCCCGAG
ACCATGGTAC CTGTCGTTGC GGTTTTTGCT GCGACCAGCG GGCAAGCGGT GCACCTGGGA
GAAGAGGTGG GTGTGGGCGC CATTCTGGGC GCCCCGATGA TGCTGTCCAC GCTGACGTTG
TTCATGATGG CGCTGTTTGT ATCGCCACAG CGCGGCTGGC GCGGAGCATT AAATCCGGAA
CCTACCGGCC TGCGTCGCGA TCTTGGCTGG TTTCTGATTG CCTTCGGCCT CTCGACCGTT
GCCCTTTTCG TGCCTCACCA CATTACTCTG GCGCGTATCG GCATCGGCCT GATGCTGGTC
ACATTGTATT TTCTGTATGT GATGGTGACC CTGCGCGCCT CTGCGGCGCT GGTCGCCGAG
GGACACGGCA CCGAAGCAGG GCACGCCTTG TACTTGAGCA AGACGGGCCT GCCCACGAAG
ATGCAGGTCA TTTTGATTCA GCTTGCCATA GGACTTGGCA TGATCGTCTT TGGCGCCAGC
CTTTTTGTCG ACGGAATCGA GGGACTCTCG CACTGGCTCG GTATTTCTGC GCTGATCCTG
TCTTTACTGG TGGTGCCCAT CGCGACGGAG CTGCCGGAGA AGATCAACAG CATCCTGTGG
GTTCGCCGCG GCAAGGATAC GCTGGCGTTT GGCAACATCA CCGGGGCGTT GGTCTTTCAA
GGGAGCCTGC TGCCCGCTAT TGGGGTGATG CCAGGGCCAT GTCAACCTTA G
 
Protein sequence
MDLASIPIIR CITHSAARCG VQALWHNVPM NILLLVAALL IILAGAEAFT NALEHLGDRL 
GISEGVTGSI FAAVGTALPE TMVPVVAVFA ATSGQAVHLG EEVGVGAILG APMMLSTLTL
FMMALFVSPQ RGWRGALNPE PTGLRRDLGW FLIAFGLSTV ALFVPHHITL ARIGIGLMLV
TLYFLYVMVT LRASAALVAE GHGTEAGHAL YLSKTGLPTK MQVILIQLAI GLGMIVFGAS
LFVDGIEGLS HWLGISALIL SLLVVPIATE LPEKINSILW VRRGKDTLAF GNITGALVFQ
GSLLPAIGVM PGPCQP