| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0731 |
|---|
| Symbol | |
|---|
| ID | 6876693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 692929 |
|---|
| End bp | 693915 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788611 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002219189 |
|---|
| Protein GI | 198282868 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000108123 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG AAAACAAAAA GCATCATACC CATTGGCAAC TATTGCTGCA GATCGTCTTT
ACGGTCGGCA TCCTGTTTTG GCTCCTGCAC AACACCAACT GGCAGGAACT GGGTCAGCGC
TTTGCGGATA TGCGCCCGCT CTGGTTCGTG GCGGCCGTGT TGTCCTACGC CATGAATCTG
TCGGTGTCCG CCATACGCTG GCGCATCATT CTCATGGCGT TGGAGCGCTC CGCACCCATG
CTCTGGTTGC TGCGGCTGAA CTGGGTGGGT GCCTATTTCA ATCAGATACT GCCGGGGTCC
GTGTCCGGTG ACGTGATCCG CGCCTGGTAC ACCCGCCACC AGACCCACTC CCTGCCGCTG
GCGCTGGCCG CGGTATTCGG AGACCGCTTC ATGGGTTTGG GGGCGCTGAT TGCCATCGCC
GCCGTCGCCT TTGTGCTGGG CGGTGAGCGG GTGGGATTGC TGCCGCAGAT GGGTTGGACG
ATCGGGATTC TGGTCATTGC TTACGTCCTG ATTGTATTTT TGATTCTGAG CCCATTGCTC
AACTTTCTGG AAAAGTTTGC GGGTAAACTG GGCGAAAAGC TGCACGACAT TCGTCTCGGC
ATGGGCGCGC TGCTGCGTCA TCGCCTGGCC CTCTCCGGAA CCATTGTACT CTCCTTTGTG
GTGCAATTTT TTTCGATCCT GACCTTCTGG CTGCTCGCCC GTGCCCTGGG CGAAGCCCCC
GACCCCGTGG CGGTCTGGGT GGTCTGGCCG GTGATCAGCC TTTTTCTGGC CTTACCCATC
TCTTTTGCGG GCTGGGGGCT GCGTGAGGGG CTGATGGTGT TTTATCTGTC TTATCTGCAC
ATGGGGCATG ATCAGGCCCT GGCGCTCTCA CTTTTGCTGG GCTTCACCGT CGTGCTGACC
AGCCTGCCGG GTGCGCTGCT CTGGATCGGG CTGCACCGCC ACCATCAGGC TCCGCCAGAT
TTGAAAATGC CGCCCGCCTC GCGTTAA
|
|---|
| Protein sequence | MSKENKKHHT HWQLLLQIVF TVGILFWLLH NTNWQELGQR FADMRPLWFV AAVLSYAMNL
SVSAIRWRII LMALERSAPM LWLLRLNWVG AYFNQILPGS VSGDVIRAWY TRHQTHSLPL
ALAAVFGDRF MGLGALIAIA AVAFVLGGER VGLLPQMGWT IGILVIAYVL IVFLILSPLL
NFLEKFAGKL GEKLHDIRLG MGALLRHRLA LSGTIVLSFV VQFFSILTFW LLARALGEAP
DPVAVWVVWP VISLFLALPI SFAGWGLREG LMVFYLSYLH MGHDQALALS LLLGFTVVLT
SLPGALLWIG LHRHHQAPPD LKMPPASR
|
|---|
| |