Gene Lferr_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0726 
Symbol 
ID6876688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp687450 
End bp688298 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content63% 
IMG OID642788606 
Productprotein of unknown function DUF52 
Protein accessionYP_002219184 
Protein GI198282863 
COG category[R] General function prediction only 
COG ID[COG1355] Predicted dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.14688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000254524 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCCG GGGGGTGTTC CGTGAAACTT GTCAGACCAG CAGCGGTGGC CGGTATGTTT 
TATCCTGGCG AGGCTGCCGT TTTGCGGACC GAGGTAGAGC GTTTGCTGGC CAGAGCTGAA
CAGGACGGTG AAGCGGCCAG TGCCCCATGG CCCAAGGCCA TCATTGTCCC CCATGCGGGC
TATATCTACT CGGGAGCGGT GGCCGCTTCC GGTTACGCCC TGCTGGCCAA GGGGCGTGGG
CATATCCGCC GGGTGGTGCT TCTGGGGCCG GCACATCGTC TGCCATTTCG CGGTCTCGCC
CTGCCGGGTG TTCAGGCCAT GCAAACGCCG CTGGGTACTG TCGCGGTGGA TCAGGCGGGG
GTGGAGGCAC TGGCCGGGTT GCCCGAGGTC CGGGAAATGC CAGCCGCGCA CGCTCAGGAA
CATGCCCTGG AAGTACAATT GCCTTTCATC CAGGAGGTGC TGGGTGACGT CAGCGTCGTC
CCGCTGGTGG TGGGAGATGC CCGTCCGGAC GAAGTGGCAC GGGTTCTGGA GAAGCTCTGG
GGTGGCGAGG AGACGGTCAT CGTGATCAGT TCCGACCTCT CTCACTATCA TCCTTACGCT
GAAGCCCGTG CCATAGACCA CCATACGGTG GAGGAAATAT TGCGCTTCGA TCCCACGCCC
ATAGACCACG AGCAGGCTTG CGGCGCCACG CCCATCAACG GCCTTCTCCC GGTCGCCCGC
AAGCACCACT TGCACCCGCG TCTGGTGGGT CTGTGTAACT CGGGTGATAC CGCAGGGTCG
CGTGATGCGG TGGTGGGCTA TGCCGCAGTC GCTTTTTACG GAGAGAGCCA TGACCACACA
GGAAGGTGA
 
Protein sequence
MAAGGCSVKL VRPAAVAGMF YPGEAAVLRT EVERLLARAE QDGEAASAPW PKAIIVPHAG 
YIYSGAVAAS GYALLAKGRG HIRRVVLLGP AHRLPFRGLA LPGVQAMQTP LGTVAVDQAG
VEALAGLPEV REMPAAHAQE HALEVQLPFI QEVLGDVSVV PLVVGDARPD EVARVLEKLW
GGEETVIVIS SDLSHYHPYA EARAIDHHTV EEILRFDPTP IDHEQACGAT PINGLLPVAR
KHHLHPRLVG LCNSGDTAGS RDAVVGYAAV AFYGESHDHT GR