Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0726 |
Symbol | |
ID | 6876688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 687450 |
End bp | 688298 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788606 |
Product | protein of unknown function DUF52 |
Protein accession | YP_002219184 |
Protein GI | 198282863 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.14688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000254524 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCCG GGGGGTGTTC CGTGAAACTT GTCAGACCAG CAGCGGTGGC CGGTATGTTT TATCCTGGCG AGGCTGCCGT TTTGCGGACC GAGGTAGAGC GTTTGCTGGC CAGAGCTGAA CAGGACGGTG AAGCGGCCAG TGCCCCATGG CCCAAGGCCA TCATTGTCCC CCATGCGGGC TATATCTACT CGGGAGCGGT GGCCGCTTCC GGTTACGCCC TGCTGGCCAA GGGGCGTGGG CATATCCGCC GGGTGGTGCT TCTGGGGCCG GCACATCGTC TGCCATTTCG CGGTCTCGCC CTGCCGGGTG TTCAGGCCAT GCAAACGCCG CTGGGTACTG TCGCGGTGGA TCAGGCGGGG GTGGAGGCAC TGGCCGGGTT GCCCGAGGTC CGGGAAATGC CAGCCGCGCA CGCTCAGGAA CATGCCCTGG AAGTACAATT GCCTTTCATC CAGGAGGTGC TGGGTGACGT CAGCGTCGTC CCGCTGGTGG TGGGAGATGC CCGTCCGGAC GAAGTGGCAC GGGTTCTGGA GAAGCTCTGG GGTGGCGAGG AGACGGTCAT CGTGATCAGT TCCGACCTCT CTCACTATCA TCCTTACGCT GAAGCCCGTG CCATAGACCA CCATACGGTG GAGGAAATAT TGCGCTTCGA TCCCACGCCC ATAGACCACG AGCAGGCTTG CGGCGCCACG CCCATCAACG GCCTTCTCCC GGTCGCCCGC AAGCACCACT TGCACCCGCG TCTGGTGGGT CTGTGTAACT CGGGTGATAC CGCAGGGTCG CGTGATGCGG TGGTGGGCTA TGCCGCAGTC GCTTTTTACG GAGAGAGCCA TGACCACACA GGAAGGTGA
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Protein sequence | MAAGGCSVKL VRPAAVAGMF YPGEAAVLRT EVERLLARAE QDGEAASAPW PKAIIVPHAG YIYSGAVAAS GYALLAKGRG HIRRVVLLGP AHRLPFRGLA LPGVQAMQTP LGTVAVDQAG VEALAGLPEV REMPAAHAQE HALEVQLPFI QEVLGDVSVV PLVVGDARPD EVARVLEKLW GGEETVIVIS SDLSHYHPYA EARAIDHHTV EEILRFDPTP IDHEQACGAT PINGLLPVAR KHHLHPRLVG LCNSGDTAGS RDAVVGYAAV AFYGESHDHT GR
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