Gene Lferr_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0718 
Symbol 
ID6876680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp678641 
End bp678916 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content61% 
IMG OID642788598 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_002219176 
Protein GI198282855 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.485199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000920527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACGAG TAACAGTAGA AGATTGTCTG GAGCATGTGG ACAATCGTTT TGAATTAACT 
TTGGTGGCGG CGCGACGGGC GCGGCAATTG GCCTCCGGCG CTGCGCCGGA AGTGGAGCCG
GGACGTGACA AAAATACGGT CATAGCTCTG CGCGAAGTGG CCGCCGGCAA GGTGAGCCGG
GCGATTCTGG ACGAGCAGAT GCCGCCACCG TTACCCAACT TCCCCGGTGC AGCGAACCGC
GAGGCAACTG GAGCTGAGGA TGCCGCTGGC GAGTGA
 
Protein sequence
MARVTVEDCL EHVDNRFELT LVAARRARQL ASGAAPEVEP GRDKNTVIAL REVAAGKVSR 
AILDEQMPPP LPNFPGAANR EATGAEDAAG E