| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0705 |
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| Symbol | |
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| ID | 6876667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 662318 |
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| End bp | 665992 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788585 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_002219163 |
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| Protein GI | 198282842 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.113545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000969857 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCGCGGT TGCGCCTGAT CCTTGCCGGT CTCCGCCGTT TCGGCGGATG GCTGCTGGCC
GTCGTGCCGA CGTTGCTGGT ATTGCTGGCG GGGGCTTTTT ATCTCCTGGT GGTTCCCCGG
CTCGACCTTT TGCGGCCCTA CGTTTCACAG TCTTTGTCGC GGTCTTTGGG AGCGCCGGTG
TCGGTACAGG GCATGCACCT GGGCTGGAAT TGGGGACCAT CGCTGGAACT GGCGGCGATG
CGGGTGGGTA CGCCGTCCCG GCCCGAACTG ACGCTGCAAG GGGTGCATCT GCGCCTTTTC
GCCTTGCCCC TGCTTTGGGG GGACTGGGTA GCCCAGTATT TTAGCGTGGC AGACGGGGTG
GTGTCTGTCG TTCAAACAGC CGATGGCTGG CGGGTGGCCG GGCAGAAGCC AGGACCCAGT
GGAAGAATGC TGCCACTGGA TCTGAACTGG GCACATGTGG ATGTCCGACA CCTGACCGTG
CAATGGCGCT CCCAGCCTCA GGCCAACCCT GTCCTCCTGC ATGTGCAGTG GCAGAGCAGT
GGCGGTTTGC GCCCCCAGAT GCAGATGCAG GTGCGCTGGT CAGCCCAGGG TCTGTTGCGT
TACACCGGCG CAGTGCGCGG CATCTTCCCG CGTCCGGGGC GCTCCTCGGG CAACGGTAAG
TGGGTGTTGG AGTCGTTGCC TTTGTCCTGG CTCCATCAAT TGGATACGCA TCTGCCGGCG
TTGACCGGAA GCATGAGCAG CCATGGGTAT CTGCAGTGGC GTTATGGAGT GCCACGCCTG
GCCAGCGGGC AATTTGTCCT GCACGACGCC GGGCTGGACG CCAGACAGTG GACACAGATC
CATGGCCGTT TGAGCTGGAA TGGAACGGGT TCCTCCGGAA CATTGCAGCT TGCCGACGTG
ACAGGACTTG CTGTACAACC CCTGGCCGCG CGATTGGGGC TCGACTGGCG CCGTCGCCTG
CAATGGCAGA TAGAGGCGCC GCTGCTTCCC GCCGCACTCC TCCGGAGCGT GCCGGAAACG
GCCCTGCCCG TCCCATTGCG CTGGATACCC CGGCAACAGT GGCGGGGCAG CTTGCGCAAC
CTGCACTTCC GCTCCGGCGG TACTGGACAC CAGGCTGCGG CCTGGCAGCT TCAGACGGTA
CTGCGTGACG TCGCTGTCTC GCCCCATGGA AACTGGTTTG GCGTGCAGGG TCTCAGCGGT
GACGTCAGCC TTCGTCCAGA AGCCTTGCAG CTTCATCTCG CGAGTCGGCA GTTCACTCTG
GACTGGCCGC AACGTTTCGC GGCACCGCTG CGCCTGCGTG AAGTGTCCGC CCGGATCGTT
GCCCGGAAAG CCGGTACCGA CTGGTCGATT CGGGCCGATC CCATCGTGTT GCAGGGACCA
GGTCACCTGC ATGCCAGTGT GGCGGTGCAA GGTCAGGAAC TGCGCCTGAG AGCCAGACTC
GACGATATGC CGGCGACGGC GATAGCCGAT TTCGTACCCC GGACCGGCAT CAGCCCGGCC
CTGCGCCACT GGCTGTTGCG GGCCTTTCAG GCGGGATCCG TGCAGCATGC CGATCTGCAA
TGGCAGGGGC CATGGAACCA CCTGCCGAGC CAGGCGCCGG GTGAGCATTT TTCCCTGAAG
GCCGATTTCC GCCACGTCAC CCTGCATTTT GCCCCGCACT GGCCGGTGGC GTCGCAGATG
AACGCACAAC TCCTCTGGAG GGGAGACCAT CTCTCCGTCC GGAGCCGCCA GGGTGATATT
TTCGGGGTGC CGGTGGCTTC CGCCAGTGCC GATCTGGACC ATCTGTTCGC GCCCCATACC
TCGCCGTTGC AGATCACGGT GAATACGCCG GTCGCGCTCG AAAAAGTGCT GCCTTTTTTG
CGGGCAACCC CCATACTGGA AGGCAAGTCC GTGGCGGATA TCCCCCTGCA CCTGACGGGG
CAGGGGCAAT TGCAATTAGC CCTCAGCATC CCTTTCGGGC CGGAAAAGAC TGCGGTGAAT
GGTCGGGTCG ATGTCCGTGA CATGGGGGTC GGCTGGGACG CTTGGCAGGC CACGGGTATG
CAGGGGCCGG TTTATTTCCA GCGGGACAAA ATTCAGGCCG GTGCGTTGAA CGGCGTTTTT
GCCGGTGGCC CGATGCAGGC GAGTTTGCGG GCCAGTCAAC TGGAAACCGC GCCGCGGCTG
GATTTTTCGC TGCAGGGTGC ATTGCAGGCG GCGGATCTGC CCGTGCCGCA GCGCTGGCGT
ACGGCTTTCC GTGGTGCTGT GCCATACCAG GGCAGTGGGA CGTTACTGAA CAACGAGTTA
CATTTCAGCG GTGGTGCGGA TTTGCGCCAG ACGCGCAGTG ACTTGCCGCA GCCTTTGAGC
TGGGCATCGG GCAAGGGCGG AAACCTGACC TTCCAGGGTC AGGGCGATGT GACCCGTCAT
CTGCAGGCCG ATTTGAGACT GCCGGTGGGG TCTGCCGTCC TGGCCTGGCA GCGGGGGCCA
TCGGTCTGGC GATGGCAGGC AGGAGCCGCA CGCCTGGGTG GGGGAACCAC CCCGCCGCTG
CCCAAGACCG GATTTTCCCT TCGGGGCAGT GCCAACAGCT TCGCTGTATG GCCGTGGCTG
AGTCTGCTGA AGAACGAAGA GGATCGTGGT ACATGGCCGG AAATCCGCTT CGACCTGCAT
TGGCGGCACC TGCTGCTTTT TGAACAGGAT TGGCCGGACG TGCGGATGCG CGGTCAGGCG
GCGGCGGAGA AGCTGCATCT GCAATTGACC GGTCCCCAGG TGGCGGGTGC CCTGCAATAT
ACGCGCGCGG TACCGCCGGC GGATTCTGCG CAATTGCGCC TGGATATCCG GAAATTAAGG
ATCGCGGCGC CTTCATCTCC CCAGGTTCCG CCCTCTGGTT TTCCGCAGAC GCTGGAGGGA
GCAACTGGCA GCCCGCTGGC GCTCCACGCT CATATCGCCC AACTCGATTG GCATGGCCAC
AAGGTGCGGG ACGTGCTGCT GGATGCGGGG CGATCGGCGA CGGGCTGGAA GATCGCCATG
ATCAAAGGCG ATTGGGCGGG CAGTCAATGG GATTTCAGGG GATCGTGGCA GGGCGCCGGG
GCAGGTCAGT CGGCCTTTCA GGGGAATATC CGCAGCGACA ATATCGCCCC CGTTCTGCAG
GACATCGGCA TGGAGACCCT GGACTACGGC CGCGCCGATT ATGCGGGACA AGTGTCCTGG
CCGGGCGCGC CCTGGGATTT TTCGGTGGCG CACCTCAGCG GCAACATCCA GTCAAAGCTG
TGGAATGGCC GTCTCCGGAA ACTGGGTACA GATATTTCCT GGCTCGTATT CCTCAATCCC
ACCACATTGT TCAGAGATGT GATCACCTTT GATTATCGCC CGCTCTTTGG CAGAGGACTG
TTCTTCTCAA AGCTTTTTGC CGATTTTCAG ATACAGAACG GTGTCGCCCG TACCCGCAAC
ATGCTTCTTC AGTCCAGCGC TCTGGAAATG GCGGGGCGCG GCGCCATCGA TCTGGCGCAT
CAGTCCCTGA ATATGGAACT GCAGGTTTAC CCGCTGCAGA GTTTCGACCT GCTTCTCGGG
CGTTTTCCCA TACTGGGTCC CGCCCTCTTT GGGAAATCGG GTAAGGTGTT AGAATGGCAT
TATCAGGTTG ACGGACCCTG GGGGCACCCC GTGGTGCGTC AGGTGCATGC GCCGGCCACG
GCCGGGAAGG ACTGA
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| Protein sequence | MSRLRLILAG LRRFGGWLLA VVPTLLVLLA GAFYLLVVPR LDLLRPYVSQ SLSRSLGAPV
SVQGMHLGWN WGPSLELAAM RVGTPSRPEL TLQGVHLRLF ALPLLWGDWV AQYFSVADGV
VSVVQTADGW RVAGQKPGPS GRMLPLDLNW AHVDVRHLTV QWRSQPQANP VLLHVQWQSS
GGLRPQMQMQ VRWSAQGLLR YTGAVRGIFP RPGRSSGNGK WVLESLPLSW LHQLDTHLPA
LTGSMSSHGY LQWRYGVPRL ASGQFVLHDA GLDARQWTQI HGRLSWNGTG SSGTLQLADV
TGLAVQPLAA RLGLDWRRRL QWQIEAPLLP AALLRSVPET ALPVPLRWIP RQQWRGSLRN
LHFRSGGTGH QAAAWQLQTV LRDVAVSPHG NWFGVQGLSG DVSLRPEALQ LHLASRQFTL
DWPQRFAAPL RLREVSARIV ARKAGTDWSI RADPIVLQGP GHLHASVAVQ GQELRLRARL
DDMPATAIAD FVPRTGISPA LRHWLLRAFQ AGSVQHADLQ WQGPWNHLPS QAPGEHFSLK
ADFRHVTLHF APHWPVASQM NAQLLWRGDH LSVRSRQGDI FGVPVASASA DLDHLFAPHT
SPLQITVNTP VALEKVLPFL RATPILEGKS VADIPLHLTG QGQLQLALSI PFGPEKTAVN
GRVDVRDMGV GWDAWQATGM QGPVYFQRDK IQAGALNGVF AGGPMQASLR ASQLETAPRL
DFSLQGALQA ADLPVPQRWR TAFRGAVPYQ GSGTLLNNEL HFSGGADLRQ TRSDLPQPLS
WASGKGGNLT FQGQGDVTRH LQADLRLPVG SAVLAWQRGP SVWRWQAGAA RLGGGTTPPL
PKTGFSLRGS ANSFAVWPWL SLLKNEEDRG TWPEIRFDLH WRHLLLFEQD WPDVRMRGQA
AAEKLHLQLT GPQVAGALQY TRAVPPADSA QLRLDIRKLR IAAPSSPQVP PSGFPQTLEG
ATGSPLALHA HIAQLDWHGH KVRDVLLDAG RSATGWKIAM IKGDWAGSQW DFRGSWQGAG
AGQSAFQGNI RSDNIAPVLQ DIGMETLDYG RADYAGQVSW PGAPWDFSVA HLSGNIQSKL
WNGRLRKLGT DISWLVFLNP TTLFRDVITF DYRPLFGRGL FFSKLFADFQ IQNGVARTRN
MLLQSSALEM AGRGAIDLAH QSLNMELQVY PLQSFDLLLG RFPILGPALF GKSGKVLEWH
YQVDGPWGHP VVRQVHAPAT AGKD
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