Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0700 |
Symbol | |
ID | 6876662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 655038 |
End bp | 655868 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642788580 |
Product | hypothetical protein |
Protein accession | YP_002219158 |
Protein GI | 198282837 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000140392 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000902529 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTCTTT TCTCCTTTGT GGTTTTAGGG CGACTCCGGG TTGCCCTTTT TTACATGGAG CAGCCTGTGT CCCCGTCGGC CGAAAGAGCT TTTACTCTGG TTCACCCCAA TGGCGACCGC GTCTGCGGAC TCATTCACGA AAACCATACC GACCCCGTCG GTATCTTCCT CCCTGGCTTC GCCTCCAATA TGGAAGGCAC CAAATCGCAG ATCCTCGCCC GCAACGCGCA GGCGCAAGGT TGGTCCTGGG TACGCTTTGA TCCACGTGGC GTCGGGCGCT CCGATGGACC ATTCCAGGCG CTGACCCTGT CCCGGTATCT GGCCGACCTC CGGTTGATTC TACATCATAT GCTGCAGGAT CGCCCGGTGC TGCTGGTGGG TTCCAGCATG GGCGGATGGC TGGGCACCAT CGCCGCCACC CGATGGCCGG AACAGATCCG CGCCCTGCTG CTCATTGCCC CCGCTTACAA CTTCATTCAG GAAATTTTCC GGCGTTTGCC CGCTGCCGAA AGGCAAGCCT GGGAGGACAG CAATCTGCGC TGCTGGGAGG ATCCTTACGG ACTCGGTGAG TTACACATGC GCTTCGACCT GGTCGCCGAC AGTTGGCGCT ACGACCTGCT GCGCTTTCCG CCGTACCTGC ACTGTCCGGT GGAGATTCTG CACGGCAGCG CCGATGAGGC CGTACCTCTC GCCCTCAGCT ATCGGTTCGC CGCCCGCGCC CATGCGCCAG AACTGGCCAT CCGTCCCTTA CCAGGCGTCG ATCATCGCCT ACGAGGTGCC GATGCCACGC TCCTGCGCAG CCTGCAATCC CTCTGGACCC GCATCTCCTG A
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Protein sequence | MFLFSFVVLG RLRVALFYME QPVSPSAERA FTLVHPNGDR VCGLIHENHT DPVGIFLPGF ASNMEGTKSQ ILARNAQAQG WSWVRFDPRG VGRSDGPFQA LTLSRYLADL RLILHHMLQD RPVLLVGSSM GGWLGTIAAT RWPEQIRALL LIAPAYNFIQ EIFRRLPAAE RQAWEDSNLR CWEDPYGLGE LHMRFDLVAD SWRYDLLRFP PYLHCPVEIL HGSADEAVPL ALSYRFAARA HAPELAIRPL PGVDHRLRGA DATLLRSLQS LWTRIS
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