| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0698 |
|---|
| Symbol | groEL |
|---|
| ID | 6876660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 652918 |
|---|
| End bp | 654573 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642788578 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_002219156 |
|---|
| Protein GI | 198282835 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000118072 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000086232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCA AACAAGTAGC CTTTGCTGAA CATGCCCGCG AGAAGATGTT GCGTGGCGTT
AACGTACTCG CCGATGCCGT CAAGGTCACC TTGGGTCCCA AGGGTCGTAA CGTGGTGCTC
GACAAGTCTT TCGGCGCCCC CACCATTACC AAGGACGGCG TCTCCGTCGC CAAGGAAATC
GAACTGGCTG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGAAAGAAGT CGCCTCCCAG
GCCTCCGACG AAGCCGGTGA CGGTACCACC ACCGCCACCG TTCTGGCCCA GGCCATCATC
CGCGAAGGCC TCAAGGCCGT CATCGCCGGC ATGAACCCCA TGGACCTGAA GCGCGGCATC
GACAAATCGG TCATCGTCGT CGTCGAGGAG CTGAAGAAGC AATCCAAGCC CTGCAAGACC
CAAAAGGAAG TGGCCCAGGT AGGTACCATC TCCGCCAACT CTGACGACTC CATCGGCAAG
ATCATTGCCG AAGCCATGGA GAAGGTCGGC AACGAAGGCG TCATCACCGT GGAAGAAGGT
TCCGGCCTCG CCAACGAGTT GGACGTCGTC GAAGGTATGC AGTTCGACCG CGGTTACCTC
TCCCCCTACT TCGTCAACAA CCAGGACAAG ATGGTTGCCG AACTGGAGAA TCCCTATATC
CTCCTGCACG ACAAGAAAAT TTCCTCCATC CGCGACATGC TGCCCATCCT GGAGCAGGTC
GCCAAGTCCA GTCGTCCGCT GCTGATCGTG GCCGAAGATG TCGAAGGCGA AGCGTTGGCC
ACTCTGGTCG TCAACACCAT GCGCGGCATC ATCAAGGTCG CTGCGGTCAA GGCCCCGGGT
TTTGGTGATC GTCGCAAGGC GATGCTCGAG GACATGGCCA TCCTGACCGG CGGCCGCGTG
GTCTCCGAAG AAATCGGCAT GAAGCTGGAA AGCACCACCC TCGCCGATCT CGGCCAGGCC
AAAAAGATTG TCATCGACAA GGAAAACACC ACCATGATCG ATGGCGCCGG TCAGCAGAGC
GAGATCAAGG CGCGCGTTGA GCAGATCCGT CGTCAGATGG AAGATGCCAG CTCCGACTAC
GATCGCGAGA AGCTTCAGGA GCGCGTGGCC AAGCTGGCCG GTGGCGTTGC CGTCATCAAG
GTCGGTGCCG GTTCCGAGAT GGAAATGAAG GAAAAGAAGG CCCGTGTCGA AGACGCCCTG
CATGCTACCC GTGCGGCCGT CGAAGAAGGC ATCGTCCCCG GCGGCGGTGT GGCGCTGGTC
CGTGCCCGTC ATGCGCTGGA AGGCTTCAAG ACCGCCAACC ACGACCAGGA CATGGGTGTT
GCCATCATCC GTCGCGCCAT CGAAGAGCCG TTGCGTCAGA TCGTCGCCAA TGCCGGCGGT
GAAGGCAGCG TGGTTCTGAA CAAGGTTGTG GACGGTAAAG ACGGCTACGG CTACAACGCC
GCGACCGACG AATATGGCGA CATGTTCGAG ATGGGCGTCA TCGACCCGAC CAAGGTCACC
CGCACCGCGT TGCAGAAGGC CTCCAGCATT GCCGGCCTGA TGATCACCAC GGAAGCCATG
GTCACCGAAC TGCCGAAGAA AGACGACAAG TCCGGCGGCG ATATGGGCGA CATGGGCGGC
GGCATGGGCG GCATGGGTGG TATGGGCGGC TTCTAA
|
|---|
| Protein sequence | MPAKQVAFAE HAREKMLRGV NVLADAVKVT LGPKGRNVVL DKSFGAPTIT KDGVSVAKEI
ELADKFENMG AQMVKEVASQ ASDEAGDGTT TATVLAQAII REGLKAVIAG MNPMDLKRGI
DKSVIVVVEE LKKQSKPCKT QKEVAQVGTI SANSDDSIGK IIAEAMEKVG NEGVITVEEG
SGLANELDVV EGMQFDRGYL SPYFVNNQDK MVAELENPYI LLHDKKISSI RDMLPILEQV
AKSSRPLLIV AEDVEGEALA TLVVNTMRGI IKVAAVKAPG FGDRRKAMLE DMAILTGGRV
VSEEIGMKLE STTLADLGQA KKIVIDKENT TMIDGAGQQS EIKARVEQIR RQMEDASSDY
DREKLQERVA KLAGGVAVIK VGAGSEMEMK EKKARVEDAL HATRAAVEEG IVPGGGVALV
RARHALEGFK TANHDQDMGV AIIRRAIEEP LRQIVANAGG EGSVVLNKVV DGKDGYGYNA
ATDEYGDMFE MGVIDPTKVT RTALQKASSI AGLMITTEAM VTELPKKDDK SGGDMGDMGG
GMGGMGGMGG F
|
|---|
| |