Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0671 |
Symbol | |
ID | 6876633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 623597 |
End bp | 624436 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788552 |
Product | AAA ATPase |
Protein accession | YP_002219130 |
Protein GI | 198282809 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCAAA CGTTACTGGC CCTCTACGGG CTCAAGTGGA ATCCCTTCTC CGCCGATCTG CCCATTGCGG CGGTCAGTGT CCCGCCCAAA GTCGAGGATT TCTGCTGGCG GATAGAACAT GCTCTGGTCC GGGAGGGGGG CTTCGCTCTG ATCCAGGGCG ATCCCGGCAC CGGCAAGAGC GTGATCCTGC GCTTGCTGGC GGAGCGCCTG TCCCGGTTGC CGGATCTGAC CGTCGGCGCC ATCCATCACC CGCAGAGCAA TCTCGCGGAC TTTTACCGGG AACTGGGAGA TATCTTTGCC GTCTCCCTCA AACCCAGTAA CCGCTGGGGC GGCTTCAAGG CCCTGCGCGA GCGCTGGCTC GCCCATCTGG AGGCCACCCG CCGTCGCCCG GTGTTGCTCA TTGACGAGGC CCAGGAGATG AATGCCCCGG TGCTCTGCGA ACTGCGCCTG CTGTCCAGTG CCCGCTTCGA TTCCCAGAGC TTGCTCAGTG TCCTCCTCGC CGGGGATGCC CGACTCACCG AAAAACTGCG CCGGGAAGAA CTGGTCCCGC TGGGCAGTCG CATCCGGGTC CGTCTGCACA CCGAGTCTGC CAGCCGTAAT GAACTGCTCG GCTGCCTGGA ACACCTGATG ACCGAAGCCG GTAACGCCGG ACTGATGACG GCAGGTCTCT GCCAGACCCT CTGTGATCAT GCCATGGGTA ATTACCGGGT GCTCACCCAA ATGGCGGCCG AACTCCTGGC GGCCGCCACC CAACGCCAAC TGGATCAACT GGACGAGAAG CTGTTCCTCG AACTCTACGG CCCCGCCCAG CAACCCGCCC GGCGCAAAGC CGCACACTGA
|
Protein sequence | MSQTLLALYG LKWNPFSADL PIAAVSVPPK VEDFCWRIEH ALVREGGFAL IQGDPGTGKS VILRLLAERL SRLPDLTVGA IHHPQSNLAD FYRELGDIFA VSLKPSNRWG GFKALRERWL AHLEATRRRP VLLIDEAQEM NAPVLCELRL LSSARFDSQS LLSVLLAGDA RLTEKLRREE LVPLGSRIRV RLHTESASRN ELLGCLEHLM TEAGNAGLMT AGLCQTLCDH AMGNYRVLTQ MAAELLAAAT QRQLDQLDEK LFLELYGPAQ QPARRKAAH
|
| |