Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0668 |
Symbol | |
ID | 6876630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 620661 |
End bp | 621602 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642788549 |
Product | integrase family protein |
Protein accession | YP_002219127 |
Protein GI | 198282806 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTCT CAGAACTGAT TTCTCTCTAC ATCGCCCATA AACGTGCGCT CGGATATCGG TTTCTAACAG AGGACCACTT GTTGAGATCT TTTTGCCGGG CAGTCGGTGA TAGGCCAATA GAAACTATCG GTGCAGACGC CGTATCTATT TTTTTAAATG GCAAGGGGTC CGTTACGGCC TACTGGTACA AGAAATATCA TGTGTTAACC GGATGTTACC GATTCGCATT GGCACGCGGG ATGGTCACTG CAATCCCGCT GCCTCGCAGT GTACCAAAGC AGGACGGGCC CATATTTGTG CCTTATATTT ATTCCCACGC AGAGTTGAAA AGACTGATTG ATGTCCTTCC CGCTCTTTGC GCCGGACGCT CCAGAATCGA CGATTACGTC TTCAAAGCCC TTCTGTTACT GATGTATGGT GCAGGACTTA GAATCAGTGA AGCGCTATCG CTCCATATCC ATGACGTCGA CCTGCAACAG ACCATTCTAT ATGTTCGCGA GACGAAGTTT TACAAGACCC GCATAGTCCC ATTAGGCAAG GATTTAACCC AAATTCTGAA TGAATATATC GCCAAACGGA ATAACCGCTA CTCAGCAGCT ACAGATGCGC CGTTCTTCTG CTTCCGTGAC GGCACACCAC TGAGTAGATC CGCCGCCCAT GGTCTGTTTC GGCGCGTACG CGCTAAAGCT GACGTCCTCA AAGAGGGTGG CCCGAGGCAT CAGCCACGCC TTCACGATCT TCGCCACTCA GCCGCTGTGC ATCGCCTTAT TGCCTGGTAT CGCTGCGGTG CAGATTTGCG CGATTTGTTG CCCAAGTTGG CAACCTATCT TGGGCACGTC GATCTTTCGG CAACACAACG TTATTTGACC ATGACACCAG AGTTACTTCA CGAGGCGAGC CTGCGCTTCG CACACTATGC ATTGGAGAAA GACCATGACT GA
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Protein sequence | MNLSELISLY IAHKRALGYR FLTEDHLLRS FCRAVGDRPI ETIGADAVSI FLNGKGSVTA YWYKKYHVLT GCYRFALARG MVTAIPLPRS VPKQDGPIFV PYIYSHAELK RLIDVLPALC AGRSRIDDYV FKALLLLMYG AGLRISEALS LHIHDVDLQQ TILYVRETKF YKTRIVPLGK DLTQILNEYI AKRNNRYSAA TDAPFFCFRD GTPLSRSAAH GLFRRVRAKA DVLKEGGPRH QPRLHDLRHS AAVHRLIAWY RCGADLRDLL PKLATYLGHV DLSATQRYLT MTPELLHEAS LRFAHYALEK DHD
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