Gene Lferr_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0667 
Symbol 
ID6876629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp619670 
End bp620668 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642788548 
Productintegrase family protein 
Protein accessionYP_002219126 
Protein GI198282805 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.580243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TGACCCTGCT TGGCCCCTGG ATACGGCGAT TTCTACTGGA GTATCTGGTA 
CGAGAGCGCA ATCTTTCGAT AAATACCCAG CGCAGCTATC GAGATATGCT GTCCCTTTTT
CTGCCCCACG TGAGTAAACA ACTCAACAAA TCCGTGGACC GATTAACGGT ATCTGATCTG
TCGGCAGACC TTATCCGTCA ATTCCTTAGT GATATTGAGG AAAGCCGCCA CTGTCTCGCC
GCCACCCGCA ATCAGCGCCT CGGCGGCCTG CACGCGTTGG CTCGATTCAT TGGTGAAAAT
AGTCCTGAGC ATATCGAGTG GTGTTCACAA ATCCGGCTGA TTCCTTTTAA AAAAACGGCA
TATCCAGGCA TTACCTATCT CGAAAAGCCA GAAATGGACG CCCTTTTAGA ATCTCCAGAT
CGCCAGACCC CTCAAGGCCA ACGTGATTAC GCCTTATTAC TGTTTCTCTA CAACACTGGG
GCGCGTGCCA GTGAAGCTGC CGATCTCAGG ATCGTTGATG TGGATTGGCA TGCTCAATGC
GCCCACATTA TCGGCAAAGG TAACAAGCGG CGTACCTGTC CATTGTGGCC GACCACTCTG
GATCAATTGC GTGCGCTAGC AACGCAACGT GGGTTGGATC AACGAGTTTT TTTAAATCGC
AACGGCCAAC CCATCACACG CTTTGGTATC CATACGATGG TCGAACGACA TGCTGCTAGG
GCTTGTGTGC AAGTGCCATC AATGAGTACG AAGCAGGTCA GTCCACATGT GATCCGCCAC
AGCACGGCAA CCCACCTTTT ACGTGCTGGC GTGGACATCA ATACCGTCCG AGCCTGGCTG
GGACACGTTT CGCTCACTAC GACCAACATC TACGCTGAGA CTGACCTCGA GACTAAAACT
CGTGCGTTGG CGACATGTGC TCCGCCCACA GCAGAGGGGA TGGCAACGAA ACATTGGCGT
CAGCAGCCGG ACCTGATGGC CTTCCTCCAC GGCTTATAG
 
Protein sequence
MTDVTLLGPW IRRFLLEYLV RERNLSINTQ RSYRDMLSLF LPHVSKQLNK SVDRLTVSDL 
SADLIRQFLS DIEESRHCLA ATRNQRLGGL HALARFIGEN SPEHIEWCSQ IRLIPFKKTA
YPGITYLEKP EMDALLESPD RQTPQGQRDY ALLLFLYNTG ARASEAADLR IVDVDWHAQC
AHIIGKGNKR RTCPLWPTTL DQLRALATQR GLDQRVFLNR NGQPITRFGI HTMVERHAAR
ACVQVPSMST KQVSPHVIRH STATHLLRAG VDINTVRAWL GHVSLTTTNI YAETDLETKT
RALATCAPPT AEGMATKHWR QQPDLMAFLH GL