Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0659 |
Symbol | |
ID | 6876621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 614224 |
End bp | 614661 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642788540 |
Product | protein of unknown function DUF1486 |
Protein accession | YP_002219118 |
Protein GI | 198282797 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.984641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCATCA GTAGCAAGGC AAAGGAAATA CTCACGCAAT TCACCCGCGA GGTATGGAGT GAAGGCAATA TTGAAGCGTC GGATAAATAT ATCGCCCCAA AGTACACGGT GCTTCACGAC CCTGGTGACC CATGGGAAGG TCGCGAACTT GACGTCGCTG GCTACAAGGA GCGGGTCAAG ACGTTGCGGG CTGCGTTTCC CGATCAGTGC TTCGACATAC AGGGCCTCTT TGCCGACGGT GATGCAGTTG TGATGACTTG GCTTTGGACA GCTACGCACA AAGAGGACAT TCCCGGTTTC CCCTCGACCG GCAAGCAAAT CAAGATGTCG GGGGCTACGG TCTACTATTT CGACGGTAAC CGACTCACTG GGCATTGGCA GATCACCGAC CGTCTAGGCG TGTATCAGCA GTTACGCCAA GCGGCCGCAG GTGCCTGA
|
Protein sequence | MSISSKAKEI LTQFTREVWS EGNIEASDKY IAPKYTVLHD PGDPWEGREL DVAGYKERVK TLRAAFPDQC FDIQGLFADG DAVVMTWLWT ATHKEDIPGF PSTGKQIKMS GATVYYFDGN RLTGHWQITD RLGVYQQLRQ AAAGA
|
| |