Gene Lferr_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0659 
Symbol 
ID6876621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp614224 
End bp614661 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID642788540 
Productprotein of unknown function DUF1486 
Protein accessionYP_002219118 
Protein GI198282797 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.984641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCA GTAGCAAGGC AAAGGAAATA CTCACGCAAT TCACCCGCGA GGTATGGAGT 
GAAGGCAATA TTGAAGCGTC GGATAAATAT ATCGCCCCAA AGTACACGGT GCTTCACGAC
CCTGGTGACC CATGGGAAGG TCGCGAACTT GACGTCGCTG GCTACAAGGA GCGGGTCAAG
ACGTTGCGGG CTGCGTTTCC CGATCAGTGC TTCGACATAC AGGGCCTCTT TGCCGACGGT
GATGCAGTTG TGATGACTTG GCTTTGGACA GCTACGCACA AAGAGGACAT TCCCGGTTTC
CCCTCGACCG GCAAGCAAAT CAAGATGTCG GGGGCTACGG TCTACTATTT CGACGGTAAC
CGACTCACTG GGCATTGGCA GATCACCGAC CGTCTAGGCG TGTATCAGCA GTTACGCCAA
GCGGCCGCAG GTGCCTGA
 
Protein sequence
MSISSKAKEI LTQFTREVWS EGNIEASDKY IAPKYTVLHD PGDPWEGREL DVAGYKERVK 
TLRAAFPDQC FDIQGLFADG DAVVMTWLWT ATHKEDIPGF PSTGKQIKMS GATVYYFDGN
RLTGHWQITD RLGVYQQLRQ AAAGA