Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0640 |
Symbol | |
ID | 6876602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 598975 |
End bp | 600465 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642788522 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002219100 |
Protein GI | 198282779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGATC AGGAACTCAA TGACCAGATG CAGGTGCGGC GCGACAAGCT GGGACAGTGG CGCAGCGAAG GCCATGCCTA TCCCAACGGC TTCCGCCGCG ATGCCCTGGC GGGCGACCTG CAAGAGCGTT ATGGCGATAT GGACGCCACG GCGCTGGAGC AGGAGCCCAT CGAGGCACGG CTCGGCGGGC GGCTGATGAG CCGCCGGGTC ATGGGCAAGG CCAGTTTCGC CGACATTCAG GATCAGTCCG GGCGTATTCA ACTCTTTGTC AGCCGCGATA ATCTGGGCGA AGAGGTCTAC GCGCGCTTCA AGGGCCTGGA TTTGGGCGAC ATCATCGGTG TGGATGGTAT CCTGTTCCGC ACCAAGACCG GTGAATTGTC CCTGAAGGTG CATAGCCTCC AACTGCTGAG CAAGGCCCTG CGTCCGCTGC CGGAAAAATG GCACGGGCTC GCCGACCCGG AAACCCGCTT CCGCCAGCGC TATGTCGATC TGATCGTCAC CGAGGCCACC CGCCGCACCT TCCAGATTCG TGCGGAAACG GTGGCGGCCC TGCGCGATGG TCTGCGCCAG CGCGGCTTTT ATGAAGCGGA GACGCCCATG ATGCAGCCCG TCCCCGGTGG TGCCACGGCG CGGCCCTTTG TCACCCACCA CCATGCCCTC GACATGACCC TTTACCTGCG TATCGCCCCG GAGCTGTACC TCAAGCGGTT GGTGGTGGGC GGCATTGAGC AGGTCTTCGA GATCAACCGC AACTTCCGCA ATGAAGGTAT TTCCACCCGC CACAATCCCG AGTTCACCAT GCTCGAATGG TACGAGGCCT ACGCCGACCA CGTGCGCGCC ATGGACCTCA CCGAGACCCT GATCCGCGCC GCGGCACAGG CGGCCCTGGG CACCACGGCG ATAAGCTATC AAGGGCTGGA GATCGACCTC GGCAAACCCT TCCACCGCCT GACGGTGACG GAATCGGTGC GTGCCCATAA CCCCGATCTG GCGGATGCCG ATCTGCGGGA CCCCGCAGTG CTGGCCGCCA AGCTCGCGCA GTTGCACCTG CCCTGTCAGC CCGCCTGGGG CTGGGGCAAA CGTCTCATCG AAATCTTCGA GAAGACGGTG GAAGGCCATC TCCAGCAGCC CACCTTCATC ACCGAGTATC CCCTGGAGGT CAGCCCGCTG GCGCGCCGCA ATGATCTCGA CCCCGAGGTC ACGGATCGTT TCGAGCTGAT GATCGCCGGC CGCGAGTTGG CCAACGGCTT CTCCGAGTTG AATGATCCCG AAGACCAGTC CGCCCGCTTC CGGGCGCAGG TCGAGGCTAA GGATGCCGGG GACGAGGAGG CGATGTTCTT CGACGCCGAC TATATCCGTG CCCTGGAATA TGGCATGCCG CCGACCGCAG GGGTGGGGCT GGGCATTGAC CGTCTGGTCA TGCTGCTTGC TGACCAGCCC AGCATTCGCG AGGTGATTCT CTTCCCCCAT CTGCGGCCGG AACAGTCATG A
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Protein sequence | MVDQELNDQM QVRRDKLGQW RSEGHAYPNG FRRDALAGDL QERYGDMDAT ALEQEPIEAR LGGRLMSRRV MGKASFADIQ DQSGRIQLFV SRDNLGEEVY ARFKGLDLGD IIGVDGILFR TKTGELSLKV HSLQLLSKAL RPLPEKWHGL ADPETRFRQR YVDLIVTEAT RRTFQIRAET VAALRDGLRQ RGFYEAETPM MQPVPGGATA RPFVTHHHAL DMTLYLRIAP ELYLKRLVVG GIEQVFEINR NFRNEGISTR HNPEFTMLEW YEAYADHVRA MDLTETLIRA AAQAALGTTA ISYQGLEIDL GKPFHRLTVT ESVRAHNPDL ADADLRDPAV LAAKLAQLHL PCQPAWGWGK RLIEIFEKTV EGHLQQPTFI TEYPLEVSPL ARRNDLDPEV TDRFELMIAG RELANGFSEL NDPEDQSARF RAQVEAKDAG DEEAMFFDAD YIRALEYGMP PTAGVGLGID RLVMLLADQP SIREVILFPH LRPEQS
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