| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0634 |
|---|
| Symbol | |
|---|
| ID | 6876596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 592945 |
|---|
| End bp | 594075 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788517 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_002219095 |
|---|
| Protein GI | 198282774 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTT ATACCGGCAT TATCGACCAT TACCGCGCCT TCCTGCCCCT GGCTCCTGAA
ACCCCGGCGG TGAGCCTGGG TGAGGGCAAT ACGCCACTGA TCGAGTGTAT CAACCTGCCC
CGCCAGCTTG GCCTCGATCT CCGCCTTTTC CTCAAATTTG AGGGCCTGAA TCCCACCGGC
TCCTTCAAGG ACCGTGGTAT GGCCATGGCG GTGACCAAGG CCAAGGAAGA CGGCAGCGAG
ATGGTGATCT GCGCCTCCAC CGGCAACACT TCGGCGGCAG CGGCGGCCTA TGCGGCGCGG
GCGGGAATGC GCGCCTTCGT GGTGATTCCG GAAGGCAAGA TTGCCCTCGG CAAGCTCTCT
CAGGCGATGA TGCATGGTGC CATGGTGTTG CAGATTCGCG GCAACTTCGA TGCGGGCATG
CAGATCGTCC AGGAAGTGGC GGCCAATGCG CCGATTACCC TGGTGAATTC GGTTAACCCT
TACCGCTTGC AGGGTCAGAA GACGGCGGCC TTCGAGATTA TCGAAGCATT GGGTGAAGCG
CCCGATTATC ACGCCCTGCC CGTGGGGAAT GCCGGCAATA TCACCGCCCA CTGGATGGGC
TATTGTGAAG CCACCGATGG ACGGACCGAT AAGTCCCAGC CCTTGACCGC CTCCTGCAAG
TTCTGTAATG GCACCTGTAG CTACGGTCAC GGTAAGGCCG GAAAACGACC GAAGATGCTG
GGTTTTCAGG CGGCAGGCAG TGCCCCCTTC ATCGTCGGCC ACTACGTGAA GGACCCCGAG
ACCATCGCCA CGGCCATCCG TATCGGCCAC CCCATGTCCT GGGATCAGGC GCATCGGGTG
CAGGCGGAAA GCGGCGGCTG GTTTGGCAGT CATAGCGATG CCGAGATTCT GGAAGCGCAG
CGCTGGCTGG CGCAATATGA GGGCGTTTTC TGCGAACCGG CCTCGGCGAC TTCGGTGGCG
GGGGTGGTTG CTGAGGCCCG CGCCGGAAAA ATTGAAGCCG GTGCGACGGT AGTCTGTACT
CTCACCGGGC ATGGCCTGAA AGATCCCGAT ACCGCCATCG CTCAGGGTGG CGAAGTGCTC
ACCGTGGATG CCAGTCTGGA GGCGGTGCAG CGCGCCATCC TGGATCGCTG A
|
|---|
| Protein sequence | MSRYTGIIDH YRAFLPLAPE TPAVSLGEGN TPLIECINLP RQLGLDLRLF LKFEGLNPTG
SFKDRGMAMA VTKAKEDGSE MVICASTGNT SAAAAAYAAR AGMRAFVVIP EGKIALGKLS
QAMMHGAMVL QIRGNFDAGM QIVQEVAANA PITLVNSVNP YRLQGQKTAA FEIIEALGEA
PDYHALPVGN AGNITAHWMG YCEATDGRTD KSQPLTASCK FCNGTCSYGH GKAGKRPKML
GFQAAGSAPF IVGHYVKDPE TIATAIRIGH PMSWDQAHRV QAESGGWFGS HSDAEILEAQ
RWLAQYEGVF CEPASATSVA GVVAEARAGK IEAGATVVCT LTGHGLKDPD TAIAQGGEVL
TVDASLEAVQ RAILDR
|
|---|
| |