Gene Lferr_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0626 
Symbol 
ID6876588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp585284 
End bp586699 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content58% 
IMG OID642788509 
Productglutamine synthetase, type I 
Protein accessionYP_002219087 
Protein GI198282766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA GCCCCAGTGA TGTGGTCAAA TTGATTCAGG AAAAAGACAT CAAGTTCGTT 
GATTTCCGCT TTACCGATAC CAAGGGCAAG GAGCAGCACG TCTCCGTTCC CGGGCATGTC
ATCGAAGAAG ACACCTTTAC CGAAGGCAAG GCTTTTGACG GCTCCTCCAT CGCCGGCTGG
AAGGGCATCA ACGAATCGGA CATGATTCTT TTGCCTGACC CGGATTCTGC GGTGCTCGAC
CCCTTTATGG ATGAAACCAC CCTTCTTCTC CGCTGTGACG TCATCGAGCC CGCCACTGGT
CAGGGCTATG AGCGCGATCC CCGCTCCGTG GCCAAGCGCG CCGAAATCTA CCTGAAGAGC
ACCGGTATTG CCGACACGTC TTTCTTCGGT CCTGAAAACG AATTCTTCGT GTTCGATTCC
GTGACCTGGA ATATCGATAT GAGCGGTTGC GCCTACAAGG TGGACGCCGA AGAAGCCGCC
TGGAATTCGG GCAAGGAATA TGAATCCGGC AATATGGGAC ATCGCCCCGG CGTGAAGGGG
GGGTATTTTC CGGTTCCGCC GGTGGACTCC GCTCAGGACC TGCGCTCGGC CATGTGCCTG
GCCATGGAAG AGATGGGCTT GAAAGTGGAA GTCCATCACC ATGAGGTGGC CACGGCCGGG
CAGCACGAAA TCGGCGTCGG CTTCAATACG CTGACCCGCA AGGCGGACGA GGTGCAGATC
CTCAAGTATG TCGTCCACAA CGTGGCGGCG GCCTACGGCC AGACGGCCAC CTTCATGCCC
AAGCCCATCG TCGGTGACAA CGGCAGCGGC ATGCACGTCC ACCAGTCCCT CGGCAAGGAC
GGCAAGAACA TCTTCGCGGG TGATCTGTAC GGCGGATTGT CGGAAATCGC GCTGTATTAC
ATCGGCGGCA TCATTAAACA CGCCAAGGCG ATCAATGCGC TAACCAACCC CAGTACCAAC
AGCTACAAGC GTCTGGTACC TCATTTCGAG GCCCCGGTGC TACTCGCCTA TTCCGCCAAG
AACCGTTCGG CATCCATCCG CATTCCCTTC GTCAACAGCC CCAAGGCACG GCGCATCGAA
GTGCGTTTCC CGGACTCTAC CGCCAACCCC TACCTGGCAT TCTCTGCCAT GCTGATGGCG
GGCCTGGACG GTATCCAGAA CAAAATCCAT CCCGGCGACG CCATGGACAA GAATCTTTAC
GACCTGCCCG CCGAGGAACA GGCCAACATC CCCGGTGTGG CCGCCTCTCT GGAAGAAGCC
CTGCGCGCCC TGGAAGCCGA CCATGACTTC CTCATGAAGG GTGGTGTGTT CTCCGAGAGC
TGGCTGGAAG GTTATCTGGA TGTGAAATGG GCCGAGGTGC AGGCCTTGCG CATGACCACC
CATCCGGTGG AGTTCCAGAT GTACTACAGC CTCTGA
 
Protein sequence
MGYSPSDVVK LIQEKDIKFV DFRFTDTKGK EQHVSVPGHV IEEDTFTEGK AFDGSSIAGW 
KGINESDMIL LPDPDSAVLD PFMDETTLLL RCDVIEPATG QGYERDPRSV AKRAEIYLKS
TGIADTSFFG PENEFFVFDS VTWNIDMSGC AYKVDAEEAA WNSGKEYESG NMGHRPGVKG
GYFPVPPVDS AQDLRSAMCL AMEEMGLKVE VHHHEVATAG QHEIGVGFNT LTRKADEVQI
LKYVVHNVAA AYGQTATFMP KPIVGDNGSG MHVHQSLGKD GKNIFAGDLY GGLSEIALYY
IGGIIKHAKA INALTNPSTN SYKRLVPHFE APVLLAYSAK NRSASIRIPF VNSPKARRIE
VRFPDSTANP YLAFSAMLMA GLDGIQNKIH PGDAMDKNLY DLPAEEQANI PGVAASLEEA
LRALEADHDF LMKGGVFSES WLEGYLDVKW AEVQALRMTT HPVEFQMYYS L