Gene Lferr_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0621 
Symbol 
ID6876583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp580923 
End bp581564 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID642788504 
ProductYceI family protein 
Protein accessionYP_002219082 
Protein GI198282761 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCGC ACAAAAATAA ATCATGGTTT CTAGTTTGCG CGACTTTGAT GCTGGGTATG 
GCTGGAGGCG CCAGCGCGGC GCCAGCGCAC TATGCGCCCC TCAATGGTAA TCCGGACGGG
AGCTATACCA TCGATCCGCA GCATACCAAT GTGCTGTTTA CGATCGGTCA TGTGGGGATT
ACCGAGTTTA CCGGGCATTT CGACAAAATC TCCGGAACAT ACACCTTTAA CAATACCGTT
CCACAAAAAG ACCGGGTACG CATCACCATC CCTGCCGCCA GTATCAATAC CAACTTTGCG
CTTCGCGACC AGCACCTGCG CAGCAAGGAG TTTTTTGATG TAAAGAAATA TCCGGATATC
ACCTTCGTCA GCACCAAATA TGCGCCCAAT GGGGACAAGG CTGGAAATCT GTATGGCAAC
CTAACCATGC ACGGTGTGAC AAAGCCGGTC ATGTTCAAGG TGCGTGAGAT CGGTGCAGGC
GAAATTTCCT ATTTGCCGAA ACCCTGGGGT GGCTATTTGT CTGGTTTTGT CGCGACCACC
ACCATCCGCC GCTCTGATTT CGGTATGACT GCGTACTTGC CGGAGGGGTT ATCCAATACC
ATCCACATCA AGGTCGAAGT GGAAGGCGTG AAACAATCTT GA
 
Protein sequence
MFSHKNKSWF LVCATLMLGM AGGASAAPAH YAPLNGNPDG SYTIDPQHTN VLFTIGHVGI 
TEFTGHFDKI SGTYTFNNTV PQKDRVRITI PAASINTNFA LRDQHLRSKE FFDVKKYPDI
TFVSTKYAPN GDKAGNLYGN LTMHGVTKPV MFKVREIGAG EISYLPKPWG GYLSGFVATT
TIRRSDFGMT AYLPEGLSNT IHIKVEVEGV KQS