Gene Lferr_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0613 
Symbol 
ID6876575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp571761 
End bp572486 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID642788496 
Productputative transcriptional acitvator, Baf family 
Protein accessionYP_002219074 
Protein GI198282753 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCA TCGCCGTCGG CAATACCCGC ACCCTGCTGG CACACACCCA CGATGGCGTG 
CATTTCGACA GCGTCAGCGT GGCCACTTCG CTGCCACCCA CGGAAATCCT GCAGCAGCCC
GGCTTGACAT GGCTCAGCGC GCCGAACCGG GAACCCGTCG CGCTGGGCGG CGTCGTACCT
GCGGCGCTTG CCGCCTGGCG GGAAGCCTTG GCCACGGCAG AGGTCCGCGA ACCCGACCCC
GGCTTTTTTC GCCGCGCCGT GCCGCACGAC TATCATCCGC CGGAAAGCCT CGGCTTTGAC
CGCCGTTGCT GCCTGCTCGC CGCCGCCATG GACTACCCCG GCCAGGACAG CATCGTCATC
GACATGGGCA CCGCCATCAC CATCGACCTG CTGGCTGGCG GACATTTCCG GGGCGGACGC
ATTCTGCCGG GTATCGCCAT GAGCCTGCGC GGTCTGCATG AAGGCACGGC ACTCCTTCCT
GAAGTCGTCC TGAACGCCCC AGCGGAAATG CTGGGCAATG ACACCAGCAA CGCCATTCAG
GCCGGGGTCA TCCACCTCTT TGCCGATGCC CTGCGCGGCG CCATTACCGA CTTTCGCCAG
TACAGCCCCC AGGCACGGAT ACTGATCACC GGTGGCGATG CCGAACGTTG GCAACCCGGC
ATCGCTGGTA GCCTGTACCA GCCCCATCTG CTTCTGCGCG GCTTTTATCT GTGGATACGG
GGATGA
 
Protein sequence
MIFIAVGNTR TLLAHTHDGV HFDSVSVATS LPPTEILQQP GLTWLSAPNR EPVALGGVVP 
AALAAWREAL ATAEVREPDP GFFRRAVPHD YHPPESLGFD RRCCLLAAAM DYPGQDSIVI
DMGTAITIDL LAGGHFRGGR ILPGIAMSLR GLHEGTALLP EVVLNAPAEM LGNDTSNAIQ
AGVIHLFADA LRGAITDFRQ YSPQARILIT GGDAERWQPG IAGSLYQPHL LLRGFYLWIR
G