Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0613 |
Symbol | |
ID | 6876575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 571761 |
End bp | 572486 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642788496 |
Product | putative transcriptional acitvator, Baf family |
Protein accession | YP_002219074 |
Protein GI | 198282753 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCA TCGCCGTCGG CAATACCCGC ACCCTGCTGG CACACACCCA CGATGGCGTG CATTTCGACA GCGTCAGCGT GGCCACTTCG CTGCCACCCA CGGAAATCCT GCAGCAGCCC GGCTTGACAT GGCTCAGCGC GCCGAACCGG GAACCCGTCG CGCTGGGCGG CGTCGTACCT GCGGCGCTTG CCGCCTGGCG GGAAGCCTTG GCCACGGCAG AGGTCCGCGA ACCCGACCCC GGCTTTTTTC GCCGCGCCGT GCCGCACGAC TATCATCCGC CGGAAAGCCT CGGCTTTGAC CGCCGTTGCT GCCTGCTCGC CGCCGCCATG GACTACCCCG GCCAGGACAG CATCGTCATC GACATGGGCA CCGCCATCAC CATCGACCTG CTGGCTGGCG GACATTTCCG GGGCGGACGC ATTCTGCCGG GTATCGCCAT GAGCCTGCGC GGTCTGCATG AAGGCACGGC ACTCCTTCCT GAAGTCGTCC TGAACGCCCC AGCGGAAATG CTGGGCAATG ACACCAGCAA CGCCATTCAG GCCGGGGTCA TCCACCTCTT TGCCGATGCC CTGCGCGGCG CCATTACCGA CTTTCGCCAG TACAGCCCCC AGGCACGGAT ACTGATCACC GGTGGCGATG CCGAACGTTG GCAACCCGGC ATCGCTGGTA GCCTGTACCA GCCCCATCTG CTTCTGCGCG GCTTTTATCT GTGGATACGG GGATGA
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Protein sequence | MIFIAVGNTR TLLAHTHDGV HFDSVSVATS LPPTEILQQP GLTWLSAPNR EPVALGGVVP AALAAWREAL ATAEVREPDP GFFRRAVPHD YHPPESLGFD RRCCLLAAAM DYPGQDSIVI DMGTAITIDL LAGGHFRGGR ILPGIAMSLR GLHEGTALLP EVVLNAPAEM LGNDTSNAIQ AGVIHLFADA LRGAITDFRQ YSPQARILIT GGDAERWQPG IAGSLYQPHL LLRGFYLWIR G
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