Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0602 |
Symbol | |
ID | 6876564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 560875 |
End bp | 562014 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788485 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_002219063 |
Protein GI | 198282742 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.159192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTA CCACTGACTC CATCGTCGAA AAACGCCTGC TGGTGACCGG AGCCGCCGGC TTCATCGGCG CCAACTTCTG CCACTACTGG CTGCAGCAAC ATCCCCGCGC CACGCTCATC GCCCTGGACG CCCTCACCTA CGCCGGCAAC CGTCATAATC TGGAAGGGCT GGAACAGCAC AGTGGTTTCC GCTTCGTACA GGGCGACATC AATGATGCCC TGCTGGTAGA GCGGGTCATG ACCGACCATC ACCTCAACGT CATCGTCCAC TTCGCCGCCG AGAGCCATGT GGACCGCTCC ATCCACGATC CCGACGCATT CATCCAGACC AACATCCTCG GTACCCACAA TCTGTTGCGC ATCGCCAGGG CGGTCTGGCT GGACGGGCCG CAGGGATGGA TACCCCACCG CTTTCACCAT ATTTCCACCG ATGAGGTATA CGGCACCCTC GGCCCGCAGG ATCCCGCCTT TCACGAAGAG ACTCCTTACG CCCCCAACTC CCCCTACGCC GCCAGCAAGG CAGGAGCGGA CCATCTGGTC CGCGCCTATC GGCACACCTA CGGGCTCAGC ACCACCACCA GCAACTGCTC CAACAACTAC GGGCCCTATC ACTTTCCCGA GAAACTGATT CCCCTCATCA TCGTCAACAT CCTTCACAAC AAGCCCCTGC CGATCTATGG CGATGGCCGG CAGATCCGTG ACTGGCTCTA TGTGGAAGAC CATTGCCGGG GTATCGCGAC GATCCTGGAA CAGGGACGGG AAGGGGAAAG TTATAACATC GGCGGCTGCA ACGAGTGGGC CAACATCGAC ATCGTGCGGC TCATCGGCGA AATCATGGAC GAACTCTTCG CCGAAGATCC GCGATGGCTG CAAGCCTTTC CCCATTCGGC GGCGGCGCAG GGGCGGAAAA GTGCCGATCT CATCCAGCAT GTCCGTGACC GGCCCGGCCA TGACCGCCGC TACGCCATCG ACGCCACCAA AATCACCCGT GAGCTTGGAT TCAAACCTGC CGTAGACTTC CCCACCGGCA TCCGTCAGAC CATCCGCTGG TATCTGGAGC ATCCGCAGTG GTGGCAGAAA ATCATGGATG GGAGTTATCG GGAATGGCTG GATGTGCAGT ACGGGGCACT GAAAGCGTAG
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Protein sequence | MSVTTDSIVE KRLLVTGAAG FIGANFCHYW LQQHPRATLI ALDALTYAGN RHNLEGLEQH SGFRFVQGDI NDALLVERVM TDHHLNVIVH FAAESHVDRS IHDPDAFIQT NILGTHNLLR IARAVWLDGP QGWIPHRFHH ISTDEVYGTL GPQDPAFHEE TPYAPNSPYA ASKAGADHLV RAYRHTYGLS TTTSNCSNNY GPYHFPEKLI PLIIVNILHN KPLPIYGDGR QIRDWLYVED HCRGIATILE QGREGESYNI GGCNEWANID IVRLIGEIMD ELFAEDPRWL QAFPHSAAAQ GRKSADLIQH VRDRPGHDRR YAIDATKITR ELGFKPAVDF PTGIRQTIRW YLEHPQWWQK IMDGSYREWL DVQYGALKA
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