| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0593 |
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| Symbol | |
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| ID | 6876555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 553369 |
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| End bp | 554301 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642788476 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002219054 |
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| Protein GI | 198282733 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.070842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGC CAGAGGAGCA GGCCGGCGAG CGCCTCGACA CGGTGTTGAG CCAGTTGCTG
CCGGAAACCA GCCGCAGTCG TATCCAGGCC CTGCTGCGCG ATGGCCGGAT TCTGGTGGAT
GGCACGCCCG AAAAGCCCAG TGCGCGGGTG CGCGGCGGTG AGCAGGTGAT GGTCGACTGG
CCGCAGATCG AACCCAGCAA CTGGCTGGCC GAGGGCCTGC CCCTGCATAT TCTGCACGAA
GACGCGGATA TTCTTGTTTT GCACAAGCCG GCGGGGCAGC TTACCCACCC CGGCGCCGGT
CATGCCGACG GCACGCTGGT CAACGGCGTG CTGGCCCATG TGCCGGAGAA CGCCTATCTG
CCCCGCGGCG GAATCGTCCA TCGGCTGGAC AAGGACACGA CCGGTCTGCT GGTGGTGGCA
AAAACGGAAA TGGCGCGGCA GTCGCTGATC GATCAGCTCG GTGACCATAC CATGCACCGC
GAGTATCTCG CGCTGGTGAC GGGAGCGATG ACGGGAGGTG GCCGGGTGGA CGCGCCCATC
GGCCGGCACG CTCAGGATCG TCTGCGGATG ACGGTGCGTG ATGACGGCCG ACCGGCGCAG
ACCGACTATC GGCTGGTGGA GCGCTTCCCC CGTCACAGCT ATCTGCGCCT GCGCCTGGCG
ACGGGCCGCA CCCATCAGAT TCGTGTGCAT ATGACGCATA TCGGCCACCC GCTGGTGGGC
GACCCGGTCT ATGGAGGGCG GATGACGGTG CCGAAAGGAC TGGATGAGGC TGGGCTGGCC
CGCTGGCGGC AGTTCCGTCG CCAGGCGTTG CATGCCTGGC GCCTGCGTCT TTACCATCCC
GCAAGCGGAG AACTGATGAC CTGGGAAAGC CCGCTGCCCG ACGACATGAC CGAATTGCTG
GCGCTGCTGC GCCATGCGCG TGATGGTGAC TGA
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| Protein sequence | MILPEEQAGE RLDTVLSQLL PETSRSRIQA LLRDGRILVD GTPEKPSARV RGGEQVMVDW
PQIEPSNWLA EGLPLHILHE DADILVLHKP AGQLTHPGAG HADGTLVNGV LAHVPENAYL
PRGGIVHRLD KDTTGLLVVA KTEMARQSLI DQLGDHTMHR EYLALVTGAM TGGGRVDAPI
GRHAQDRLRM TVRDDGRPAQ TDYRLVERFP RHSYLRLRLA TGRTHQIRVH MTHIGHPLVG
DPVYGGRMTV PKGLDEAGLA RWRQFRRQAL HAWRLRLYHP ASGELMTWES PLPDDMTELL
ALLRHARDGD
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