| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0590 |
|---|
| Symbol | |
|---|
| ID | 6876552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 550540 |
|---|
| End bp | 552189 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642788473 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_002219051 |
|---|
| Protein GI | 198282730 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG CCCTGGCGCA GGTCAACTGC CGGGTCGGCG ATGTGGCGGG CAACGCCGAT
CGTCTGCTGG CCGCCGCCGC CGAGGCGCAG GCGGCTGGCG CCGATCTGCT GCTGACGCCG
GAGCTGGCGC TCAGTGGTTA CCCTCCCGAA GATCTGCTCC TGCGTAGCGA CTTCCTGCAG
GACTGCGATG CCGCCATGCA GCGTCTCGCG GCGGCAGCGC CCCTGCCCAT GCTGGTGGGC
CACCCCCGGC GGGTGCAGGA GCAGCTCTAC AACAGCGCCG GTCTGCTGCG TGGGGGTCGT
GCCGAGGCCT TTTACCACAA GCATTGTTTG CCGAATTACG CGGTATTCGA TGAGGTGCGC
TATTTCACGC CGGGGGCGCA GTCGCTGGTG TTCACCTGTG CCGGGATCCG CTGCGGCGTG
GCCATCTGCG AAGATGTCTG GTGCGGGCCG GGAGTGGCGC AGGCGGCCCA GGCGCAGGGT
GCCGAGTTGC TGCTGGTGCT CAACGCCTCG CCCTATCATC TGAACAAGCA GCGCGTCCGC
GAGGATGAGG TGGGCGCCCT GGCGGCCCGC TGTCATCTGC CCATCGTCTA TGTGAACCTG
GTGGGGGGGC AGGATGAACT GGTCTTCGAT GGTCAGTCCT TCGCCGCCGA CCGGAACGGG
CTGCTGGCCC TGCGCGCCGC CCGCTGCGCC GAAGCGCTGG TGCTGCTGGA TGTGGACCGG
GATGACGCCG GCATCCGTCT GCAGGCGGAC CGGCCATTGC AACCGGTGCC CGACGAGAGC
GCGGAAGTCT ACGATGTGCT GCGTCTGGGT GTACACGATT ATGTGGAAAA AAACGGCTTT
CCCGGCGCGG TGCTGGGCCT GTCCGGCGGG GTGGACTCGG CGCTGACCCT GGCGGTGGCG
GTGGACGCCC TCGGGGCGGA GCGGGTTCAC GCCTTGATCA TGCCCTCCCG CTATACGGCG
GAGATGAGCA TCGCGGACGC CGTGGCCGAG GCCCGGAGCC TGGGGGTGCG CACCGACATC
GTCTCCATCG AGGGGCTGTT CCATAGTTAT CTGGAGACAT TGGCGCCTCT GTTCGCCGGG
CGTGCGGCCG ACACCACGGA GGAGAATCTG CAGGCGCGCA TCCGCGCCGC GTTGCTCATG
GCCTATTCCA ACAAGTTCGG CCATCTGCTG CTGACCACGG GCAACAAGAG CGAAATCGCC
GTCGGCTACG CAACCCTGTA TGGTGACATG GCCGGCGGTT TTGCGGTCAT CAAGGATTGC
CCCAAGACGC TGGTCTATCG CCTCGCCCGC TATCGCAACA GCCTGGGTCC GGTGATCCCG
GAGCGGGTGC TGACCCGGCC ACCGTCGGCG GAACTGGCGC CGGACCAGCG TGATCAGGAC
AGTCTGCCGC CTTATGAGGT GCTGGATGCC ATCATCGCCG CCTACGTGGA AGAAGACCAT
AGTGCCGTGG ACCTCATCGC CGCCGGTTTT CCGGCGGAAA CGGTGATGCG GGTGCTGCGC
CTCATCGACC GCGCTGAATA TAAACGGCGT CAGGCTGCGC CCGGGGTGCG GATCAGCGCC
CGCGCATTCG GCAAGGATCG GCGTTATCCT ATCACCAATG GCTACCATTC CTGGGAAGCT
GTGTTGTCTG CGCGAGGAGT TGTGCTATGA
|
|---|
| Protein sequence | MRIALAQVNC RVGDVAGNAD RLLAAAAEAQ AAGADLLLTP ELALSGYPPE DLLLRSDFLQ
DCDAAMQRLA AAAPLPMLVG HPRRVQEQLY NSAGLLRGGR AEAFYHKHCL PNYAVFDEVR
YFTPGAQSLV FTCAGIRCGV AICEDVWCGP GVAQAAQAQG AELLLVLNAS PYHLNKQRVR
EDEVGALAAR CHLPIVYVNL VGGQDELVFD GQSFAADRNG LLALRAARCA EALVLLDVDR
DDAGIRLQAD RPLQPVPDES AEVYDVLRLG VHDYVEKNGF PGAVLGLSGG VDSALTLAVA
VDALGAERVH ALIMPSRYTA EMSIADAVAE ARSLGVRTDI VSIEGLFHSY LETLAPLFAG
RAADTTEENL QARIRAALLM AYSNKFGHLL LTTGNKSEIA VGYATLYGDM AGGFAVIKDC
PKTLVYRLAR YRNSLGPVIP ERVLTRPPSA ELAPDQRDQD SLPPYEVLDA IIAAYVEEDH
SAVDLIAAGF PAETVMRVLR LIDRAEYKRR QAAPGVRISA RAFGKDRRYP ITNGYHSWEA
VLSARGVVL
|
|---|
| |