Gene Lferr_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0570 
Symbol 
ID6876532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp532819 
End bp533985 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID642788453 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_002219031 
Protein GI198282710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA TGTCCACTTA TGCCCGGTTA CCGGTCGCTT TTGCAAGGGG TGAGGGGGTC 
TGGCTCTATG ATACCGAGGG GCGCCGTTAT CTGGACGCCC TGGCAGGGAT CGCCGTCTGT
GGCCTGGGGC ACAGCCATCC GGCGGTCACC CGCGCCCTGC AGACCCAGGC TGGGCAACTG
TTGCACACTT CCAATCTCTA CCGTATTCCG GCGCAGGAAA AGCTGTCCGA TACCCTCTGC
GCCGTCAGCG GCATGGATGC GGCCTTTTTC TGCAACAGCG GCGCAGAGGC CAATGAAGCG
GCCATCAAAA TCGCCCGCCT CCATGGTCAT GGCAAGGGCA TCGCCGAACC GCAGATTCTG
GTATTCAGCA ACGCTTTTCA TGGCCGCACC CTGGCGACCC TCACGGCCAC CGGCAATTTC
CGCATCCAGG AAGGTTTCAG CCCCCTGCTG CCGGGTTTCG TGCGCGCCCC CTATGGCGAT
CTTTCCACCG TCCGCGCCCT GGTTCAGGCC AACCCCGGCA TATGCGCCAT TCTCGCCGAG
CCCCTTCAGG GAGAAGGTGG GGTGCGCCCG GCACCGGAAG GCTTCCTGAC CGGGCTGAGG
GAGGTCTGCG ACGCGCACGG TCTGCTCCTG ATGCTGGACG AGGTGCAGAC CGGCATCGGC
CGTACCGGGG CCTTCTTCGC CTACCAGCAG ATTCCCGGCC TGCGCCCCGA CGTGCTCAGT
CTGGCCAAGG GCCTGGGCAA CGGCGTCCCC ATCGGCGCCA TGCTGGCCGG CCAATCGACG
GCCGCGCTCT TCGGGCCGGG CAAACACGGC ACCACCTTTG GCGGTGGGCC GCTGGTCTGC
GCCGCCGCCC AGGCCGTGCT CGACACCATG CAGCAAGAAG ACCTCCCCGC CCACGCCGGG
CGGATGGGCG CCCTGCTCCG GCAGCGCCTG CAGAAGCGCC TTGGCGGGCA CCCCGAGGTG
CTGGAGATAC GCGGCATGGG CCTGATGGTG GGCATCGAAC TGGCCCATAA ACCCGAACGC
CTGGTGGAGC GCGCCCTGGA GGCTGGCCTG CTCATCAACG TCACGGCTGA AAAAGTCATT
CGTCTGCTGC CCCCGCTGAT TCTGCAAGAG GCAGAAATCG ATCTTCTCGT CGCTGGCCTG
GCCAGCCTTC TGGAATCCGC ATCATGA
 
Protein sequence
MPLMSTYARL PVAFARGEGV WLYDTEGRRY LDALAGIAVC GLGHSHPAVT RALQTQAGQL 
LHTSNLYRIP AQEKLSDTLC AVSGMDAAFF CNSGAEANEA AIKIARLHGH GKGIAEPQIL
VFSNAFHGRT LATLTATGNF RIQEGFSPLL PGFVRAPYGD LSTVRALVQA NPGICAILAE
PLQGEGGVRP APEGFLTGLR EVCDAHGLLL MLDEVQTGIG RTGAFFAYQQ IPGLRPDVLS
LAKGLGNGVP IGAMLAGQST AALFGPGKHG TTFGGGPLVC AAAQAVLDTM QQEDLPAHAG
RMGALLRQRL QKRLGGHPEV LEIRGMGLMV GIELAHKPER LVERALEAGL LINVTAEKVI
RLLPPLILQE AEIDLLVAGL ASLLESAS