Gene Lferr_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0565 
Symbol 
ID6876527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp529442 
End bp529867 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID642788448 
ProductRoadblock/LC7 family protein 
Protein accessionYP_002219026 
Protein GI198282705 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCACGA AAAAGATGCA ATCCATTCTC GCTGAACTGA ACGACGGTTC AGCCGACATA 
GACGCCTCCG CGATCATTTC CACCGAAGGC CTGATGCTCG CCTCCGCCAT TTCCGGAGAG
GTGAGTGAAG ACCGGGCAGG TGCGGTGATG GCGTCCATAT CCTCCCTGGC CGACCGTGCG
ATGCGCGAGT TCAAACTCGG CAATCTGGAA CAACTGGTGA TGAAAGGGCA CAATGGCTAC
GCCCTCATGA TCCAGGCGGG GGACTATGCG GCGCTGATCG TTATCGGCTA TGGCGATGGT
CCGGAATGGA GCCTGGCGTT GCTCAGGAGC ATTCCGGCGG CAGGCGCCAT CAGCGACCTG
CTGACACCAG GCTTCGGTTG GTCTATGGAA GAAGGGCCTG TCGGGATTCC GCAAGACTCG
ATCTAG
 
Protein sequence
MRTKKMQSIL AELNDGSADI DASAIISTEG LMLASAISGE VSEDRAGAVM ASISSLADRA 
MREFKLGNLE QLVMKGHNGY ALMIQAGDYA ALIVIGYGDG PEWSLALLRS IPAAGAISDL
LTPGFGWSME EGPVGIPQDS I