Gene Lferr_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0563 
Symbol 
ID6876525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp528224 
End bp528700 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID642788446 
ProductRibonuclease H 
Protein accessionYP_002219024 
Protein GI198282703 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAA AAATCATAGA GCTCTTTACC GATGGCGGGT GCCGCGGTAA TCCCGGTATC 
GGCGCCTGGG GCGTGTGGCT GCGGCTGGCT GGACAGGAGC GGGTCTTGTG GGGCTTCGTC
CCGGAAACGA CGAACAACCG GATGGAGCTG ACGGCGGCTT TGCGCGGTCT GGAGGCGCTC
AAGCGACCCA GCGCCGTGCG GGTGATCAGT GATTCCCGTT ATCTGCGGGA TGGCATGACC
CAGTGGCTGG CTGGCTGGCA GCGCCGGGGC TGGCGGACGG CGGGCGGGGA CGCGGTCAAA
AATCGCGATA TCTGGGAGTT GTTGGCGGCG GTGGCCGCCC GCCACCAGGT CCAGTGGGAG
TGGGTGAGAG GCCACTCCGG GCATATCGAG AATGAACGGG TGGACGCACT GCTGAATCGG
GTCATGGATC AGTATGCGGC GGGCGGGCAG GCGCGGGAGG GCGAGGGATG GCTGTGA
 
Protein sequence
MPEKIIELFT DGGCRGNPGI GAWGVWLRLA GQERVLWGFV PETTNNRMEL TAALRGLEAL 
KRPSAVRVIS DSRYLRDGMT QWLAGWQRRG WRTAGGDAVK NRDIWELLAA VAARHQVQWE
WVRGHSGHIE NERVDALLNR VMDQYAAGGQ AREGEGWL