Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0563 |
Symbol | |
ID | 6876525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 528224 |
End bp | 528700 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642788446 |
Product | Ribonuclease H |
Protein accession | YP_002219024 |
Protein GI | 198282703 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAA AAATCATAGA GCTCTTTACC GATGGCGGGT GCCGCGGTAA TCCCGGTATC GGCGCCTGGG GCGTGTGGCT GCGGCTGGCT GGACAGGAGC GGGTCTTGTG GGGCTTCGTC CCGGAAACGA CGAACAACCG GATGGAGCTG ACGGCGGCTT TGCGCGGTCT GGAGGCGCTC AAGCGACCCA GCGCCGTGCG GGTGATCAGT GATTCCCGTT ATCTGCGGGA TGGCATGACC CAGTGGCTGG CTGGCTGGCA GCGCCGGGGC TGGCGGACGG CGGGCGGGGA CGCGGTCAAA AATCGCGATA TCTGGGAGTT GTTGGCGGCG GTGGCCGCCC GCCACCAGGT CCAGTGGGAG TGGGTGAGAG GCCACTCCGG GCATATCGAG AATGAACGGG TGGACGCACT GCTGAATCGG GTCATGGATC AGTATGCGGC GGGCGGGCAG GCGCGGGAGG GCGAGGGATG GCTGTGA
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Protein sequence | MPEKIIELFT DGGCRGNPGI GAWGVWLRLA GQERVLWGFV PETTNNRMEL TAALRGLEAL KRPSAVRVIS DSRYLRDGMT QWLAGWQRRG WRTAGGDAVK NRDIWELLAA VAARHQVQWE WVRGHSGHIE NERVDALLNR VMDQYAAGGQ AREGEGWL
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