Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0559 |
Symbol | |
ID | 6876521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 523174 |
End bp | 525252 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788442 |
Product | Polyribonucleotide nucleotidyltransferase |
Protein accession | YP_002219020 |
Protein GI | 198282699 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.745175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCATGA TCCGGAAAGA AGTAGATTTT GGCGGCCGCC GCCTGCAACT GGAGACGGGC CGCATGGCGC GTCAGGCGGA CGGTGCGGTG CTGGTCTCCA GCGGAGACAC GGTCGTTCTG GTGACGGCAG TGGGCCGCCG GGAGATGAAG CCGGGCCAGG ATTTCTTTCC GCTGACGGTC AATTATCAGG AGAAGGCCTA CGCGGCGGGC AAAATTCCCG GTGGTTTCTT CAAGCGTGAA GGGCGGCCCA CGGAAAAGGA GACGCTGACG TCACGCCTGA TCGATCGTCC TATCCGGCCG CTTTTCCCCA AGGGCTTCAT GAACGAAGTG CAGGTCATCG CTACGGTGGT GTCGGTGGAT CGGGATAACG ATCCCGATAT TCTGGCACTG GTGGGTGCCT CGGCGGCGCT GGCGGTTTCC GGTATTCCGT TCAATGGCCC GATTGGCGCG GCCCGGGTGG CTTACATCGA CGGGAAATAT GTGCTGAATC CCAGTTACGC GCAACTGACC ACTTCGCAAC TGGATCTCGT GGTGGCGGGA ACCCGGCAGG CCGTACTCAT GGTCGAGTCC GAGGCGCAGC AGTTGTCCGA AGAGATCATG CTGGAAGCGG TGATGTTCGG TCACGCGCAG TTCCAGCCCG TCATCGAAAC CATCGAAGCG CTGGCGCGGG AGGCCGGCAA ACCGCGCTGG GAGTGGGTGG CGCCGGTGGC CGATGAAGCA CTGGGTGTGC AGGTGCGCGA GAAAGCCACA CCGCTTCTGC AGGAGGCCTA TGCGCTGACG GAGAAGCAGG CGCGCAGCAA GCGGCTGGAA GATGTGCAGC AGGCCATGGC GGTCGAGTTT GGCAGTGACG ATGCGGGACG CGGAGACATG GTTCGCGGAC TGTTGAAAAA AATTGAAACC GGCATCGTGC GAGGACGTAT TCTGGATGGC GCGCCCCGCA TCGATGGCCG GGACAGCAAG ACGGTGCGGC CCATCACCAT CGAGGCGGGT GTGTTGCCGC GGACCCATGG TTCGGCGCTC TTCACCCGGG GGGAAACCCA GGCCTTGGTG GTGGCGACTT TGGGTACCAA GGGCGACGAG CAGATCATCG ACGCCCTGCA GGGCGAAAGC CGTGACCGCT TTATGCTGCA TTACAACTTC CCGCCCTTCT CTACCGGTGA AACGGGTATG GTGGGTTCGC CCAAGCGCCG GGAGATCGGG CACGGGCGCC TGGCGAAGCG GGCGATAGCG GCGGTCCTGC CGACCGACAG CGAATTCCCG TACAGCTTAC GGGTTGTTTC TGAGGTACTG GAGTCCAACG GCTCTTCCAG TATGGCGACG GTCTGTGGCG CCTCCTTGGC GCTGATGGAC GCGGGCGTAC CCCTCAAGGC GCCGGTGGCG GGCGTGGCCA TGGGCCTCAT CAAGGAAGGA GCGCGTTTTG CCGTCCTCAC CGATATCCTG GGCGATGAAG ATCATCTGGG CGATATGGAT TTCAAGGTGG CGGGCACGGA ACAAGGGGTG ACCGCCCTGC AGATGGATAT CAAGATCGAC GGGATTACCC GGGAAATCAT GGCGCAGGCG CTCCAGCAGG CGCTGGCGGG ACGACTGCAT ATCCTCGGCC TGATGAATGG CGTGCTGTCC AGGGGCCGTG GCGAGTTGTC CGACTACGCA CCGCGCATCA TCACCATCCA GATCAATCCG GATCGCATCC GCGACGTCAT CGGGCCGGGC GGTAAAGTCA TCCGCGCCCT GACCGAAGAA ACCGGCGCGA CCATCGATAT CCAGGACAAC GGCACGGTAA CCATCGCCTC GGTGGACGGT GAAGCCGGCG CCGCCGCGAA GCGACGTATC GAGTTGCTGA CGGCGGATGT GCAAGTCGAT ACCATTTACG ACGGAAAAGT GGCCAAGATC ATGGATTTCG GCGCCTTTGT GACGATTCTG CCGGGGCGCG ACGGTCTGCT GCACATTTCC CAGATCAGCA ACGAACGGGT CAGCGATGTC CACGACCATC TCAAGGAAGG ACAGGCGGTG CGTGTCAAGG TTCTGGAAGT GGATCGCCAG GGCAAGATCA AGCTGAGCAT GAAGGACATC CCGCAATAA
|
Protein sequence | MTMIRKEVDF GGRRLQLETG RMARQADGAV LVSSGDTVVL VTAVGRREMK PGQDFFPLTV NYQEKAYAAG KIPGGFFKRE GRPTEKETLT SRLIDRPIRP LFPKGFMNEV QVIATVVSVD RDNDPDILAL VGASAALAVS GIPFNGPIGA ARVAYIDGKY VLNPSYAQLT TSQLDLVVAG TRQAVLMVES EAQQLSEEIM LEAVMFGHAQ FQPVIETIEA LAREAGKPRW EWVAPVADEA LGVQVREKAT PLLQEAYALT EKQARSKRLE DVQQAMAVEF GSDDAGRGDM VRGLLKKIET GIVRGRILDG APRIDGRDSK TVRPITIEAG VLPRTHGSAL FTRGETQALV VATLGTKGDE QIIDALQGES RDRFMLHYNF PPFSTGETGM VGSPKRREIG HGRLAKRAIA AVLPTDSEFP YSLRVVSEVL ESNGSSSMAT VCGASLALMD AGVPLKAPVA GVAMGLIKEG ARFAVLTDIL GDEDHLGDMD FKVAGTEQGV TALQMDIKID GITREIMAQA LQQALAGRLH ILGLMNGVLS RGRGELSDYA PRIITIQINP DRIRDVIGPG GKVIRALTEE TGATIDIQDN GTVTIASVDG EAGAAAKRRI ELLTADVQVD TIYDGKVAKI MDFGAFVTIL PGRDGLLHIS QISNERVSDV HDHLKEGQAV RVKVLEVDRQ GKIKLSMKDI PQ
|
| |