| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0557 |
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| Symbol | |
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| ID | 6876519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 521974 |
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| End bp | 522855 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642788440 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002219018 |
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| Protein GI | 198282697 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.492745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTGTC AGCATGGCCT GCTGCTCCTC GACAAGGCGG CGGGTCTGAC GTCCAATGCC
GCTCTGCAAC GGGCCAAACG TCTGCTCGGC CTAAAAAAGG GCGGGCATAC GGGAAGTCTT
GACCCCATCG CCACCGGACT ACTGGTCCTG CTCTTCGGCG AGGCCACCAA AGTCTCTGAT
TATATTCTCA ATGCGGACAA GTCCTATCGG GCGACCCTGC GGCTGGGCCA GACCACGACC
ACCGGCGACA GCGAAGGCAG TGTGCTGGAA GAACGGCCTG TTGCGGTCAG CGAAGCGCAG
GTGCAGGCGG TGCTGCCGCA GTTTCTCGGA GAGATTGCGC AGATTCCGCC CATGTATTCG
GCGATCAAGC AGGGGGGTAG GCCGCTTTAC GAATTGGCGC GCAAGGGGCT GGAGGTGGAG
CGGGCGCCAC GCCAGGTACG CATCGATGCC CTCGACCTGG TTTCCCTGGA CGGTGACCGC
CTGGTGCTGG ATGTGCGCTG TTCCAAGGGT ACCTATATCC GTAGTCTGGC GGTGGACATC
GGTGCGGCAC TGGGGTGCGG TGCACATGTG GAAGGATTGC GGCGCACGTC CACCGGTCCT
TTCGATGTCG CGCAGGCACT GACCCTGGAA GGGCTCGCCG ACGTGCTCGG ACGGGGCGTG
TGCCCCCTCA AGGCCATGGA TCTGGCTCTG GAATATTTAC CGGCGGTGAC CCTGACGGAG
AACACCGCCT ATTATCTGCG TCAGGGGCAG GGGGTCGTGG TCGCCCATGC ACCTTCTCTC
GGGCGCATTC GTCTCTACGG GCCGGGGGAG CAGTTTCTCG GTTTGGGAGA GGTGATGGAC
GACGGAAAGG TGGCGCCTCG CCGCCTCATG AGCGTAAACT AG
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| Protein sequence | MSCQHGLLLL DKAAGLTSNA ALQRAKRLLG LKKGGHTGSL DPIATGLLVL LFGEATKVSD
YILNADKSYR ATLRLGQTTT TGDSEGSVLE ERPVAVSEAQ VQAVLPQFLG EIAQIPPMYS
AIKQGGRPLY ELARKGLEVE RAPRQVRIDA LDLVSLDGDR LVLDVRCSKG TYIRSLAVDI
GAALGCGAHV EGLRRTSTGP FDVAQALTLE GLADVLGRGV CPLKAMDLAL EYLPAVTLTE
NTAYYLRQGQ GVVVAHAPSL GRIRLYGPGE QFLGLGEVMD DGKVAPRRLM SVN
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