| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0541 |
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| Symbol | |
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| ID | 6876497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 499412 |
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| End bp | 499891 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642788418 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_002219002 |
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| Protein GI | 198282681 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0341165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000577221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATGC GTATTGGTCA CGGCTTTGAC GTACATGCGT TGGTGCCGGG AAGGGCTCTG
ATCCTCGGTG GCGTGTCGGT ACCCTATGAA CGCGGTCTTG CCGGCCACTC CGATGCTGAC
GTGCTCCTTC ACTCCATCTG TGATGCCCTG CTGGGGGCGG CTGCCCTGGG CGACATCGGA
CGTCATTTCC CCGATACCGA CGCCCGTTTC GAAGGTGCGG ATTCGCGGCT CCTGCTCCGA
CATTGTCGTC AGTTGGTCCA GGGGAAAGGT TTTTCGGTAG GCAACGTGGA TGCGACCATC
GTCTGTCAGC GTCCTAAATT GGCAGATCAT ATTCCGCAGA TGCGCGCCCA TATTGCTGCT
GACCTCGCTG TGGAGCTCGA TGCGGTCAAC ATCAAAGCGA CCACCACGGA GCAATTGGGC
TATACCGGTC GGGGTGAAGG CATTGCCGCC CACGCCGTCG TGCTGATTCA GCATGTCTGA
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| Protein sequence | MQMRIGHGFD VHALVPGRAL ILGGVSVPYE RGLAGHSDAD VLLHSICDAL LGAAALGDIG
RHFPDTDARF EGADSRLLLR HCRQLVQGKG FSVGNVDATI VCQRPKLADH IPQMRAHIAA
DLAVELDAVN IKATTTEQLG YTGRGEGIAA HAVVLIQHV
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