Gene Lferr_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0511 
SymbolrpsH 
ID6876467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp477475 
End bp477870 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content55% 
IMG OID642788388 
Product30S ribosomal protein S8 
Protein accessionYP_002218972 
Protein GI198282651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0171606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000407923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTGA CGGATCCTAT TGCTGATATG CTGACGCGCA TTCGTAATGC GCAACAGGTA 
AATAAGGCGA AAGTGCGGAT GCCCGCTTCC AAGCTGAAAC GTGCGATCGC ACGAGTTCTG
GTGGAAGAAG GCTATATTCA GGAAGTAAAA GAGGACGTCG CGAACGGTCA CCCCGTTCTC
GATCTGACTT TGAAGTATTA TGCTGGTGCG GGTGTGATCG CGGAAATTCG GCGAGTCAGC
CGGCCTGGTG TTCGCGTTTA CCGTGGTGCG GAAGATTTGC CGCGCGTGCG TGACGGCTTC
GGTATTGCCA TTATCTCAAC GTCTCAGGGA ATTATGACCG ATCGCGCGGC CCGTAGTGCC
GGGATTGGTG GTGAAGTTCT CTGCGTCGTG TCCTGA
 
Protein sequence
MSVTDPIADM LTRIRNAQQV NKAKVRMPAS KLKRAIARVL VEEGYIQEVK EDVANGHPVL 
DLTLKYYAGA GVIAEIRRVS RPGVRVYRGA EDLPRVRDGF GIAIISTSQG IMTDRAARSA
GIGGEVLCVV S