Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0503 |
Symbol | |
ID | 6876459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 474457 |
End bp | 475119 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642788380 |
Product | ribosomal protein S3 |
Protein accession | YP_002218964 |
Protein GI | 198282643 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.216514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000339097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACAAA AAACCAATCC AATCGGACTG CGTCTGGGAA TCATTAAGAA TTGGAATTCC CGGTGGTATG GCAAAAGCGA CTTCCAGGAG AAGCTGCTTG AAGATATCAA GGTCCGGCAG TTTATTCGGG AGCGGCTTGC AGGTGGGGCG GTTTCTGACA TTATCATTGA GCGCCCAGCG CGTAGTGCGC GCATTACCGT ACATACCGCC CGACCGGGTA TTGTGATCGG TAAAAAGGGC GAAGATATTG AAAAGCTTCG GCATGACGTA CAAAAGCGCA TGGGGGTTCC CGTGCATATC AATGTGGAGG AAATCCGCAA GCCTGAGCTG GACGCGCAGT TGGTGGCAGA AAGCGTAGCG CAGCAACTCG TCCGTCGTAT CATGTTCCGG CGGGCCATGA AGCGCGCTGT TACCAATGCC ATGCGTTTCG GTGCCTTAGG CATGCGCATT AACTGTGCCG GTCGTTTGGG TGGGGCCGAA ATTGCCCGCA CTGAATGGTA TCGAGAGGGT CGCGTTCCGC TGCACACGTT GCGCGCTGAT ATTGACTACG GTTTCGCTGA GGCCAACACC ACCTACGGAA TAATTGGGGT GAAGGTATGG ATTTTCAAAG GTGAAATTCT GGAGTGGAGC ACGGCACAAA CGGCCGCTGC CCGCCAGAAG TGA
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Protein sequence | MGQKTNPIGL RLGIIKNWNS RWYGKSDFQE KLLEDIKVRQ FIRERLAGGA VSDIIIERPA RSARITVHTA RPGIVIGKKG EDIEKLRHDV QKRMGVPVHI NVEEIRKPEL DAQLVAESVA QQLVRRIMFR RAMKRAVTNA MRFGALGMRI NCAGRLGGAE IARTEWYREG RVPLHTLRAD IDYGFAEANT TYGIIGVKVW IFKGEILEWS TAQTAAARQK
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