| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0482 |
|---|
| Symbol | |
|---|
| ID | 6876434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 452658 |
|---|
| End bp | 453311 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642788355 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002218943 |
|---|
| Protein GI | 198282622 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000816193 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000930185 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATA TTAAAGGCAT CAAAGGCATC ACACTACTTG TAGCCATCAG CGGGGGTATT
TTCGCCAGTG CAGCCTATGC GGACGGTGGC TATGTGGGTT ATGCAGTCAA TCACGGCGCC
AAGCCTGTTG TCACCAGTCG GGGTATCTGC GTGCGTGGCG GGCGTCCGGT AACGGATGGT
CCGGTGCCCG CCTATTGTGC GCCCGCGCCG GTCGCCGTGG CAGCCGCGCC GACACCGCCT
CCAGCCCCTG TACCTGCCCC CATCGCGCCT GTTGAGCAGA CGATTCTGGT GAGCAAGCCG
ATCACCATCA CCGGTATCAA CTTCAAGTTC GATTCGTACA AGCTGCTGGA TCATGACATC
CGGGTACTGG ACGAAGTGGC GAGTTTTGCC AAAAAACATC CCGAGGCCGT ACTCGACGTC
AATGGATATT GCAGTAAGGT GGGCACCTAC GCATACAATC TCAAGCTGTC CAAGCTGCGT
GCCCAGAGTG TCGCACAGTA CCTGGCCCAT CACGGGGTGG CAAGTGATCG CATGGTACTG
AAGGGTCACT CCTACGACAA TCCGGTCGCC ACTAACGCTA CCCCCCAAGG CCGCTTCCTG
AATCAGCGCG TGGAAATCAA TTCCAGCATC AAGGTTCAGA AGACCGTTCA GTAA
|
|---|
| Protein sequence | MEHIKGIKGI TLLVAISGGI FASAAYADGG YVGYAVNHGA KPVVTSRGIC VRGGRPVTDG
PVPAYCAPAP VAVAAAPTPP PAPVPAPIAP VEQTILVSKP ITITGINFKF DSYKLLDHDI
RVLDEVASFA KKHPEAVLDV NGYCSKVGTY AYNLKLSKLR AQSVAQYLAH HGVASDRMVL
KGHSYDNPVA TNATPQGRFL NQRVEINSSI KVQKTVQ
|
|---|
| |