Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0475 |
Symbol | |
ID | 6876427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 447262 |
End bp | 448395 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788348 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_002218936 |
Protein GI | 198282615 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.937307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000181593 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAGTG CCAGTATAAG TTCCGCAGAG GAGATCATCG CCGACATCGC TGCCGGTCGG ATGGTGATTC TGATGGACGA CGAGGGGCGT GAAAACGAAG GTGATCTGAT CATGGCGGCG GAGTTTGTGA CGCCCGCCGC CATCAATTTC ATGGTTTCGC AGGGGCGTGG TCTGGTGTGC CTGCCGCTCA CCCGCGAGCG TTGCGAGCGA TTGCGCCTCC CGCAGATGGT AGGGCATAAC ACTGCCAGCC TGGGCACCGC GTTCACGGTG TCGATTGAGG CTGCCCGCGG TGTCACCACG GGCATTTCCG CTGCTGACCG CGCGGTGACG ATTCGGGCGG CCATTGCAGA CGAGGCAGGC CCGGAGGATA TCGTGATGCC CGGTCACATT TTCCCTCTGG CCGCAGAACC CGGGGGCGTA CTGGTTCGCG CCGGTCATAC CGAAGCAGCG GTCGACCTTG CACGGCTGGC TGGCTGCAAA CCCGCCGGTG TCATCTGCGA AATTCTCAAT GTCGACGGCG AAATGGCGCG TTTGCCCGAC CTGCTCCCCT ATGCTGCGGA ACATGGCCTC AAAATTGGCA CCATTGCCGA CCTGATCCGC TATCGCCTGG AACGGGAGCG GATCGTACAG CGGGAGGCGA GCGGCCCGTG GCATACCCCA TGTGGCGACT TCGAACTCCA CGTTTATCGT GACTGGGTCG CCCGTGAAAC GCATTTTGCC CTGGTTCTTG GCGACCTGGA AGCGCGTGAT GAACCCGTAC TGGTAAGGGT ACAGGTTGGC AAGACGCTGA ATGATCTCTT CGCCGGTGAA GCCAGCCCGA ATGTCATCGC CTTGCGGCGG ATCGCTGCAG AAGGTCGTGG CGTGCTGGTC TATCTCCACC ATCAGGAGAG TGTCGAAGAA CTCCTGCGCG AGATCGCCGC ATTGCCTGAA AAGCCCAAGG GGCCCGGTCA GGCGGGTGAC GCCGGACGGG TTCTGCGCAC CTTTGGCATC GGCGCCCAGA TTCTCTCTGA TCTGGGGGTG CATCAGGCGG TGGTCCTCAG CGACAGTCAG TTTCAATACC GTGGTATCGG CGGCTTCGGT CTGGAGATCG TCGGCCAGCG TCCCTTTCTG GAAGTTCCCG AGGATGAGTC ATGA
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Protein sequence | MSSASISSAE EIIADIAAGR MVILMDDEGR ENEGDLIMAA EFVTPAAINF MVSQGRGLVC LPLTRERCER LRLPQMVGHN TASLGTAFTV SIEAARGVTT GISAADRAVT IRAAIADEAG PEDIVMPGHI FPLAAEPGGV LVRAGHTEAA VDLARLAGCK PAGVICEILN VDGEMARLPD LLPYAAEHGL KIGTIADLIR YRLERERIVQ REASGPWHTP CGDFELHVYR DWVARETHFA LVLGDLEARD EPVLVRVQVG KTLNDLFAGE ASPNVIALRR IAAEGRGVLV YLHHQESVEE LLREIAALPE KPKGPGQAGD AGRVLRTFGI GAQILSDLGV HQAVVLSDSQ FQYRGIGGFG LEIVGQRPFL EVPEDES
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