Gene Lferr_0472 details

Gene Information

• Locus tag: Lferr_0472
• Symbol: nrdR
• ID: 6876424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 53993
• Kingdom: Bacteria
• Replicon accession: NC_011206
• Strand: +
• Start bp: 445024
• End bp: 445515
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642788345
• Product: transcriptional regulator NrdR
• Protein accession: YP_002218933
• Protein GI: 198282612
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.687081
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.000432977
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGCACTGCC CGTTCTGTGC CTATGCGGAT ACCCGTGTGG TGGATTCCCG CCTTGCGGAT 
GACGGTGGAA GTGTACGACG GCGGCGTGAA TGTCCCCAAT GCGGGCAACG CTTCACTACC 
TTTGAACGCG CGGAACTGGC GTTGCCTGTG GTTGTCAAGA CCGACGGGCG GCGTGAATCC 
TTCAATGAAG AGAAGCTCCA GCGGGGTCTG ACCCGGGCAT TGAGCAAGAG ACCGGTAGCC 
ACCGCGCGGG TGGATGCCGC CGTGCGGATG ATCCAGCGCC GTATCCGCGA ACGTGGTGAG 
CGGGAGATCC CGGCGCGCCT CATCGGCGAA CTGGTGATGG AGGCCCTGCG TGACCTCGAT 
CCCGTCGCCT ATGTGCGTTT TGCCTCTGTT TACCGGCGCT TTGAGGACGT CGATGCGTTC 
AGCGTGGAGA TTGCGCGGAT GAAGGAGGCG GAGGTCCCCG ACGGGGGAGA CGATCTGAAT 
CGTGGCGACT GA 

 

Protein sequence

MHCPFCAYAD TRVVDSRLAD DGGSVRRRRE CPQCGQRFTT FERAELALPV VVKTDGRRES 
FNEEKLQRGL TRALSKRPVA TARVDAAVRM IQRRIRERGE REIPARLIGE LVMEALRDLD 
PVAYVRFASV YRRFEDVDAF SVEIARMKEA EVPDGGDDLN RGD