Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0472 |
Symbol | nrdR |
ID | 6876424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 445024 |
End bp | 445515 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788345 |
Product | transcriptional regulator NrdR |
Protein accession | YP_002218933 |
Protein GI | 198282612 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.687081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000432977 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCACTGCC CGTTCTGTGC CTATGCGGAT ACCCGTGTGG TGGATTCCCG CCTTGCGGAT GACGGTGGAA GTGTACGACG GCGGCGTGAA TGTCCCCAAT GCGGGCAACG CTTCACTACC TTTGAACGCG CGGAACTGGC GTTGCCTGTG GTTGTCAAGA CCGACGGGCG GCGTGAATCC TTCAATGAAG AGAAGCTCCA GCGGGGTCTG ACCCGGGCAT TGAGCAAGAG ACCGGTAGCC ACCGCGCGGG TGGATGCCGC CGTGCGGATG ATCCAGCGCC GTATCCGCGA ACGTGGTGAG CGGGAGATCC CGGCGCGCCT CATCGGCGAA CTGGTGATGG AGGCCCTGCG TGACCTCGAT CCCGTCGCCT ATGTGCGTTT TGCCTCTGTT TACCGGCGCT TTGAGGACGT CGATGCGTTC AGCGTGGAGA TTGCGCGGAT GAAGGAGGCG GAGGTCCCCG ACGGGGGAGA CGATCTGAAT CGTGGCGACT GA
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Protein sequence | MHCPFCAYAD TRVVDSRLAD DGGSVRRRRE CPQCGQRFTT FERAELALPV VVKTDGRRES FNEEKLQRGL TRALSKRPVA TARVDAAVRM IQRRIRERGE REIPARLIGE LVMEALRDLD PVAYVRFASV YRRFEDVDAF SVEIARMKEA EVPDGGDDLN RGD
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